PROXiMATE: Protein-protein complex mutation thermodynamics database. The complex shown here is 1DVF.

PROXiMATE: PROtein-protein compleX MutAtion ThErmodynamics Database

Indian Institute of Technology Madras

WILD-TYPE DATA


The binding affinity (dissociation constants) and binding free energy (ΔG) values are provided below for wild-type protein-protein complexes.
You can sort the columns by clicking on the header.

S.no.PDBChainsProtein 1Protein 2Functional ClassExperimental TechniqueIonic ConditionsTemperaturepHPubmed/LocationDissociation constant (M)ΔG (kcal/mol)Notes
1Anabaena sp. flavodoxinAnabaena sp. ferredoxin-NADP+ reductaseOEFNR-dependent NADPH cytochrome c reductase activity assayed by using Fld as the electron carrier from FNR to cytochrome c50 mM Tris-HCl298815628849 (Table 2, p. 100)3.00E-06-7.53
2Anabaena sp. flavodoxinAnabaena sp. Photosystem IOEFNR-dependent NADPH cytochrome c reductase activity assayed by using Fld as the electron carrier from FNR to cytochrome c20mM Tricine-KOH, 2mM MgCl22957.515628849 (Table 2, p. 100)5.00E-06-7.16
31BRSA:DBacillus amyloliquefaciens barnase/ribonucleaseBacillus amyloliquefaciens barstarEIStopped-flow Fluorescence50mM Tris-HCl29887739054 (Table 1, p. 481)1.00E-14-15.17
41BRSA:DBacillus amyloliquefaciens barnase/ribonucleaseBacillus amyloliquefaciens barstarEICompetitive binding with [3H] Barstar or Stopped-flow spectrophotometry100mM NaCl, 10mM acetate buffer2984.58494892 (Table I, p. 5148)9.35E-11-13.68
51BRSA:DBacillus amyloliquefaciens barnase/ribonucleaseBacillus amyloliquefaciens barstarEICompetitive binding with [3H] Barstar or Stopped-flow spectrophotometry100mM NaCl, 10mM acetate buffer29858494892 (Table I, p. 5148)1.56E-11-14.74
61BRSA:DBacillus amyloliquefaciens barnase/ribonucleaseBacillus amyloliquefaciens barstarEICompetitive binding with [3H] Barstar or Stopped-flow spectrophotometry100mM NaCl, 10mM MES2985.58494892 (Table I, p. 5148)4.50E-12-15.47
71BRSA:DBacillus amyloliquefaciens barnase/ribonucleaseBacillus amyloliquefaciens barstarEICompetitive binding with [3H] Barstar or Stopped-flow spectrophotometry100mM NaCl, 10mM MES29868494892 (Table I, p. 5148)1.15E-12-16.28
81BRSA:DBacillus amyloliquefaciens barnase/ribonucleaseBacillus amyloliquefaciens barstarEICompetitive binding with [3H] Barstar or Stopped-flow spectrophotometry100mM NaCl, 10mM MOPS29878494892 (Table I, p. 5148)1.48E-13-17.49
91BRSA:DBacillus amyloliquefaciens barnase/ribonucleaseBacillus amyloliquefaciens barstarEICompetitive binding with [3H] Barstar or Stopped-flow spectrophotometry100mM NaCl, 10mM Trizma base29888494892 (Table I, p. 5148)1.30E-13-17.58
101BRSA:DBacillus amyloliquefaciens barnase/ribonucleaseBacillus amyloliquefaciens barstarEICompetitive binding with [3H] Barstar or Stopped-flow spectrophotometry100mM NaCl, 10mM Trizma base29898494892 (Table I, p. 5148)1.83E-13-17.37
111BRSA:DBacillus amyloliquefaciens barnase/ribonucleaseBacillus amyloliquefaciens barstarEIFluorescence2988637875 (Table 1, p. 2346)6.00E-14-18.03
121BRSA:DBacillus amyloliquefaciens barnase/ribonucleaseBacillus amyloliquefaciens barstarEIIsothermal Titration Calorimetry24mM Hepes, 1mM DTT29889126847 (Table 2, p. 699)1.00E-14-19.09
131BRSA:DBacillus amyloliquefaciens barnase/ribonucleaseBacillus amyloliquefaciens barstarEIIsothermal Titration Calorimetry39mM Hepes, 1 mM DTT29889126847 (Table 3, p. 700)1.00E-14-19.09
141BRSA:DBacillus amyloliquefaciens barnase/ribonucleaseBacillus amyloliquefaciens barstarEIIsothermal Titration Calorimetry35mM Tes, 1 mM DTT29889126847 (Table 3, p. 700)1.00E-14-19.09
151BRSA:DBacillus amyloliquefaciens barnase/ribonucleaseBacillus amyloliquefaciens barstarEISurface Plasmon ResonanceHepes buffer with 150mM NaCl, 3mM EDTA, 0.005% Tween 202987.4Water-mediated interaction at a protein-protein interface, Chemical Physics, Volume 307, Issues 2-3, 2004 (Table I, p. 113)1.32E-10-13.47
161TM1E:IBacillus amyloliquefaciens subtilisin BPN'/subtilisin novoHordeum vulgare chymotrypsin inhibitor 2 (CI2)EIStopped-flow fluorescence100 mM Tris-HCl2988.610065709 (Table II, p. 44)1.92E-12-15.98
171SBNE:IBacillus amyloliquefaciens subtilisin BPN'/subtilisin novoHirudo medicinalis eglin cEI2981992167 (Table 1, p. 357)3.20E-11-14.31
181TM1E:IBacillus amyloliquefaciens subtilisin BPN'/subtilisin novoHordeum vulgare chymotrypsin inhibitor 2 (CI2)EIInhibition constant Ki calculated from the reduced rates of subtilisin hydrolysis of a chromogenic substrate0.1 M Tris, 1 mM DTT2988.615504027 (Table 1, p. 13650)3.00E-12-15.71
191TM1E:IBacillus amyloliquefaciens subtilisin BPN'/subtilisin novoHordeum vulgare chymotrypsin inhibitor 2 (CI2)EISpectrophotometry2987947796 (Table 3, p. 13883)7.00E-13-16.57
202SICE:IBacillus amyloliquefaciens subtilisin BPN'/subtilisin novoStreptomyces albogriseolus subtilisin inhibitorEISpectroscopy5mM phosphate buffer with 0.005% (w/v) Triton X-10029878276767 (Table 1, p. 555)1.80E-11-14.65
21Bacillus anthracis beta-lactamase bla1Streptomyces clavuligerus beta-lactamase inhibitor protein (BLIP)EISpectroscopy50 mm phosphate buffer with 1 mg/ml BSA298715284234 (Table II, p. 42862)2.50E-09-11.73
221CSEE:IBacillus licheniformis subtilisin carlsbergHirudo medicinalis eglin cEISpectroscopy0.1 M Tris-HCl, 0.005% Triton X-100, 0.02 M CaCl22948.39048543 (Table 1, p. 1602)1.12E-12-16.08
231R0RE:IBacillus licheniformis subtilisin carlsbergMeleagris gallopavo (turkey) ovomucoid (OMTKY3)EISpectroscopy0.1 M Tris-HCl, 0.005% Triton X-100, 0.02 M CaCl22948.311171964 (data previously accessible online here, please check SKEMPI Notes for details on the data source)2.94E-11-14.17
241R0RE:IBacillus licheniformis subtilisin carlsbergMeleagris gallopavo (turkey) ovomucoid (OMTKY3)EISpectroscopy0.1 M Tris-HCl, 0.005% Triton X-100, 0.02 M CaCl22948.312767228 (Tables 1 and 2, p. 6462, Table 3, p. 6463)2.72E-11-14.21
251R0RE:IBacillus licheniformis subtilisin carlsbergMeleagris gallopavo (turkey) ovomucoid (OMTKY3)EITitration0.1 M Tris-HCl, 0.005% Triton X-100, 0.02 M CaCl22948.39047374 (Table 1, p. 443)2.94E-11-14.17
261R0RE:IBacillus licheniformis subtilisin carlsbergMeleagris gallopavo (turkey) ovomucoid (OMTKY3)EI294Stephen Ming-teh Lu, PhD Thesis, Purdue University, 2000 (See SKEMPI for data source)2.94E-11-14.17
272B42A:BBacillus subtilis endo-1,4-beta-xylanase ATriticum aestivum xylanase inhibitor TAXI-IEISurface Plasmon Resonance10mM sodium acetate295516279951 (Table 2, p. 5876)1.07E-09-12.11
282BTFA:PBovine actin, cytoplasmic 1Bovine profilin-1High Shear Viscometry0.01 M imidazole, 0.15mM CaCl2, 1.5mM DTE, 1mM ATP29879788869 (Figure 4, p. 3267)2.30E-06-7.69
291CBWFGH:IBovine alpha-chymotrypsin/chymotrypsinogen ABovine pancreatic trypsin inhibitor (BPTI)EISpectroscopy50mM Tris, 20mM CaCl2, 0.01 % (v/v) Triton X-1002958.310339415 (Table 1, p. 177)1.14E-08-10.72
301T7CA:BBovine alpha-chymotrypsin/chymotrypsinogen ABovine pancreatic trypsin inhibitor (BPTI)EImonitoring the release of p-nitroanilide using spectrophotometry50mM Tris-HCl, 20mM CaCl2, 0.005% Triton X-1002958.28784199 (Table 1, p. 11439)1.10E-08-10.74
311N8OABC:EBovine alpha-chymotrypsin/chymotrypsinogen AEscherichia coli ecotinEIFluorescence50mM Tris-HCl, 20mM CaCl2, 0.005% (w/v) Triton X-1002948.38143850 (Table 1, p.59)4.00E-12-15.33
321ACBE:IBovine alpha-chymotrypsin/chymotrypsinogen AHirudo medicinalis eglin cEISpectroscopy0.1 M Tris-HCl, 0.005% Triton X-100, 0.02 M CaCl22948.39048543 (Table 1, p. 1602)1.49E-12-15.91
331CHOEFG:IBovine alpha-chymotrypsin/chymotrypsinogen AMeleagris gallopavo (turkey) ovomucoid (OMTKY3)EISpectroscopy0.1 M Tris-HCl, 0.005% Triton X-100, 0.02 M CaCl22948.311171964 (data previously accessible online here, please check SKEMPI Notes for details on the data source)5.26E-12-15.17
341CHOEFG:IBovine alpha-chymotrypsin/chymotrypsinogen AMeleagris gallopavo (turkey) ovomucoid (OMTKY3)EISpectroscopy0.1 M Tris-HCl, 0.005% Triton X-100, 0.02 M CaCl22948.312767228 (Tables 1 and 2, p. 6462, Table 3, p. 6463)4.83E-12-15.22
351CHOEFG:IBovine alpha-chymotrypsin/chymotrypsinogen AMeleagris gallopavo (turkey) ovomucoid (OMTKY3)EITitration0.1 M Tris-HCl, 0.005% Triton X-100, 0.02 M CaCl22948.39047374 (Table 1, p. 443)5.26E-12-15.17
361CHOEFG:IBovine alpha-chymotrypsin/chymotrypsinogen AMeleagris gallopavo (turkey) ovomucoid (OMTKY3)EI294Stephen Ming-teh Lu, PhD Thesis, Purdue University, 2000 (See SKEMPI for data source)5.26E-12-15.17
374CPAA:IBovine carboxypeptidase A1 (CPA)Solanum tuberosum metallocarboxypeptidase inhibitor (CPI)EIContinuous photometric assay with chromogenic substrate50mM Tris-HCl, 100mM NaCl2987.510691989 (Table 1, p. 1505)1.50E-09-12.03
382FTLE:IBovine cationic trypsin/beta-trypsinBovine pancreatic trypsin inhibitor (BPTI)EISpectroscopy50mM Tris, 20mM CaCl2, 0.01 % (v/v) Triton X-1002958.310339415 (Table 1, p. 177)5.88E-14-17.86
394Y0YE:IBovine cationic trypsin/beta-trypsinBovine pancreatic trypsin inhibitor (BPTI)EImonitoring the release of p-nitroanilide using spectrophotometry50mM Tris-HCl, 20mM CaCl2, 0.005% Triton X-1002958.28784199 (Table 1, p. 11439)5.00E-14-17.95
401A4YA:BBovine ribonuclease A, pancreatic (RNase A)Human ribonuclease inhibitor, placental (hRI)EImeasurement of dissociated ligand at various times0.1 M Mes, 0.1 M NaCl, 1 mM EDTA298610413501 (Table 2, p. 9278)3.10E-14-18.42
411A4YA:BBovine ribonuclease A, pancreatic (RNase A)Human ribonuclease inhibitor, placental (hRI)EIStopped-flow Fluorescence; Competitive Inhibition0.1 M Mes, 0.1 M NaCl, 1mM EDTA, 5mM DTT298610970748 ( Table 2, p. 503, Table 3, p. 504, Tables 4 and 5, p. 508)4.30E-14-18.23
421A4YA:BBovine ribonuclease A, pancreatic (RNase A)Human ribonuclease inhibitor, placental (hRI)EIHPLC quantitation of free angiogenin at various times for complexes with native hRI; Scintillation counting of free and bound radiolabeled [14C]Ang for hRI mutants0.1 M Mes, containing 0.1 M NaCl, 1 mM EDTA, 120 µM DTT, 100 µg/mL BSA29869050852 (Table 4, p. 1765)3.90E-16-21.01
432NYYA:CDClostridium botulinum neurotoxin type AHuman monoclonal antibody IgG Fab CR1Ag-AbFlow cytometry29617173035 (Table 2, p. 110)1.55E-10-13.29
44Dendroaspis angusticeps Kunitz-type serine protease inhibitor homolog delta-dendrotoxinDrosophila melanogaster potassium voltage-gated channel protein shakerRCElectrophysiology5 mM HEPES, 100mM TEACl, 2 mM KCl, 0.3 mM CaCl2, 1 mM MgCl22987.610698633 (Table 1, p. 1287)2.00E-09-11.86
451KNEA:PDrosophila melanogaster heterochromatin protein 1 (HP1)Drosophila melanogaster Histone H3Fluorescence Anisotropy/Polarization50 mM potassium phosphate buffer, 25 mM NaCl, 4 mM DTT298825790265 (Table 1, p. 2316)1.70E-05-6.5
46Enterococcus hirae copper chaperone (CopZ)Enterococcus hirae probable copper-importing P-type ATPase A (CopA)OESurface Plasmon Resonance50mM NaP, 2% acetonitrile, 0.05% dodecylmaltoside2937.411594769 (Table 1, p. 175)5.80E-06-7.02
47Enterococcus hirae copper chaperone (CopZ)Enterococcus hirae probable copper-importing P-type ATPase A (CopA)OESurface Plasmon Resonance50mM NaP, 2% acetonitrile, 0.05% dodecylmaltoside, 10µM copper(I)acetonitrile2937.411594769 (Table 1, p. 175)3.60E-07-8.64
48Enterococcus hirae copper chaperone (CopZ)Enterococcus hirae probable copper-importing P-type ATPase A (CopA)OESurface Plasmon Resonance50mM NaP, 2% acetonitrile, 0.05% dodecylmaltoside, 100µM copper(I)acetonitrile2937.411594769 (Table 1, p. 175)7.90E-07-8.18
493VR6AD:GHEnterococcus hirae V-type sodium ATPase catalytic subunits (A3B3)Enterococcus hirae V-type sodium ATPase catalytic subunits (DG)OESurface Plasmon Resonance20mM MES-Tris, 150mM NaCl, 50 µM EDTA-Na, 0.005% Tween 202986.524404436 (Table 1, 3rd page)1.60E-09-11.75
501JTGA:BEscherichia coli beta-lactamase (TEM-1)Streptomyces clavuligerus beta-lactamase inhibitor protein (BLIP)EISurface Plasmon Resonance10mM Hepes, 3.4mM EDTA, 150mM NaCl, 0.05% surfactant P202987.410772866 (Table 1, p. 506)6.83E-09-11.13
511JTGA:BEscherichia coli beta-lactamase (TEM-1)Streptomyces clavuligerus beta-lactamase inhibitor protein (BLIP)EI29810876236 (Table 1, p. 540)1.25E-09-12.14
521JTGA:BEscherichia coli beta-lactamase (TEM-1)Streptomyces clavuligerus beta-lactamase inhibitor protein (BLIP)EIhydrolysis of cephalosporin C using spectrophotometry50mM phosphate buffer with 1 mg/ml BSA298712933802 (Table II, p. 45709)5.00E-10-12.68
531JTGA:BEscherichia coli beta-lactamase (TEM-1)Streptomyces clavuligerus beta-lactamase inhibitor protein (BLIP)EISpectroscopy50mM phosphate buffer with 1 mg/ml BSA298715284234 (Table II, p. 42862)5.00E-10-12.68
541JTGA:BEscherichia coli beta-lactamase (TEM-1)Streptomyces clavuligerus beta-lactamase inhibitor protein (BLIP)EISurface Plasmon ResonancePBS with 0.05% surfactant P202987.417070843 (Table 1, p. 669, Table 2, p. 670, Tables 3 and 4, p. 671)4.77E-09-11.35
551JTGA:BEscherichia coli beta-lactamase (TEM-1)Streptomyces clavuligerus beta-lactamase inhibitor protein (BLIP)EIStopped-flow tryptophan fluorescence spectrometry and competitive displacement assay10mM Tris, 150mM NaCl296724947275 (Table 3, p. 1239)2.30E-10-13.05
561JTGA:BEscherichia coli beta-lactamase (TEM-1)Streptomyces clavuligerus beta-lactamase inhibitor protein (BLIP)EISpectrophotometric monitoring of cephaloridine hydrolysis0.05 M phosphate buffer, 1 mg/ml BSA29879891008 (Table 1, p. 2397)1.10E-10-13.58
571JTDA:BEscherichia coli beta-lactamase (TEM-1)Streptomyces exfoliatus beta-lactamase inhibitory protein II (BLIP II)EIStopped-flow tryptophan fluorescence spectrometry and competitive displacement assay10mM Tris, 150mM NaCl296724947275 (Table 3, p. 1239)1.50E-12-16.01
581F47A:BEscherichia coli cell division protein/eukaryotic tubulin homolog FtsZEscherichia coli cell division protein ZipASurface Plasmon Resonance10mM HEPES, 150mM NaCl, 3mM EDTA, 0.005% (v/v) polysorbate 202987.510880432 (Table II, p. 3185)2.16E-05-6.36
591F47A:BEscherichia coli cell division protein/eukaryotic tubulin homolog FtsZEscherichia coli cell division protein ZipAELISA10mM Na2HPO4, 1.8mM KH2PO4, 140mM NaCl, 2.7mM KCl, 0.05% Tween 202987.511278571 (Table I, p. 11982)1.90E-07-9.16
601FFWA:BEscherichia coli chemotaxis protein CheAEscherichia coli chemotaxis protein CheYOEFluorescence-monitored binding titrations50mM Tris, 50mM potassium glutamate, 25mM NaCl, 0.5mM DTT, 10% glycerol281721642453 (Table 1, p.3897)1.70E-07-9.23
611FFGA:BEscherichia coli chemotaxis protein CheAEscherichia coli chemotaxis protein CheYOEIsothermal Titration Calorimetry20mM sodium phosphate, 20mM NaCl, 1mM EDTA, 1mM PMSF, 10% (v/v) glycerol3017.47578071 (Table 1, p. 14629)1.50E-06-6.7
621FFWA:BEscherichia coli chemotaxis protein CheAEscherichia coli chemotaxis protein CheYOEFluorescence Quenching50 mM sodium phosphate, 5 mM MgCl22986.57592655 (Table II, p.24417)1.20E-06-8.07
63Escherichia coli colicin-E2Escherichia coli colicin-E2 immunity protein (ImmE2)EISubunit exchange method50mM MOPS, 200mM NaCl298715019791 (Table 2, p. 748)3.90E-15-19.65
64Escherichia coli colicin-E2Escherichia coli colicin-E9 immunity protein (ImmE9)EISubunit exchange method50mM MOPS, 200mM NaCl298715019791 (Table 2, p. 748)1.20E-08-10.8
65Escherichia coli colicin-E3Escherichia coli colicin-E3 immunity protein (ImmE3)EIIsothermal Titration Calorimetry; Fluorescence Anisotropy/Polarization50mM MOPS-NaOH, 200mM NaCl298725856265 (Table 1, p. 5253)1.20E-12-16.25
662WPTA:BEscherichia coli colicin-E9Escherichia coli colicin-E2 immunity protein (ImmE2)EIStopped-flow Fluorescence50mM Mops buffer, 200mM NaCl, 1mM DTT298718471830 (Table 5, p. 755)1.50E-07-9.3
672WPTA:BEscherichia coli colicin-E9Escherichia coli colicin-E2 immunity protein (ImmE2)EIStopped-flow Fluorescence50mM Mops buffer, 200mM NaCl, 1mM DTT29879268373 (Table 1, 22256)1.47E-08-10.68
682WPTA:BEscherichia coli colicin-E9Escherichia coli colicin-E2 immunity protein (ImmE2)EIStopped-flow Fluorescence50mM Mops buffer, 200mM NaCl, 1mM DTT29879718299 (Table 1, p. 11774)1.50E-08-10.67
691EMVA:BEscherichia coli colicin-E9Escherichia coli colicin-E9 immunity protein (ImmE9)EIStopped-flow Fluorescence50mM Mops buffer, 200mM NaCl, 1mM DTT298718471830 (Table 1, p. 748)3.26E-14-18.39
701EMVA:BEscherichia coli colicin-E9Escherichia coli colicin-E9 immunity protein (ImmE9)EIStopped-flow Fluorescence50mM Mops buffer, 200mM NaCl, 1mM DTT29879268373 (Table 1, 22256)1.82E-14-18.74
711EMVA:BEscherichia coli colicin-E9Escherichia coli colicin-E9 immunity protein (ImmE9)EIStopped-flow Fluorescence50mM Mops buffer, 200mM NaCl, 1mM dithiothretol (DTT)29879425068 (Table 1, p. 480)1.62E-14-18.8
721DKGAB:DEscherichia coli protein GrpE/heat shock protein B25.3Escherichia coli chaperone protein DnaK/Heat shock protein 70Sedimentation Velocity Analytical Ultracentrifugation25mM Mopso, 100mM NaCl, 1mM MgCl2, 1mM CaCl2, 5 µM ADP2936.815136046 (Table 1, p. 451)2.00E-07-8.98
733BP8A:CEscherichia coli PTS system glucose-specific EIICB component (EIICB-Glc)Escherichia coli making large colonies protein (mlc)Surface Plasmon Resonance10mM Hepes, 200mM NaCl, 10mM KCl, 1mM MgCl2, 1mM DTT, 0.005% Tween 20298818319344 (Table 1, p. 3754)4.14E-09-11.43
741UUZA:DGallus gallus egg-white lysozyme C (HEL/HEWL)Pseudomonas aeruginosa inhibitor of vertebrate lysozymeEIMonitoring the change in turbidity due to lysis of cells100mM potassium phosphate2986.417405861 (SI Table 3, here)1.00E-09-12.27
752I26N:LGinglymostoma cirratum antigen receptor (type II IgNAR)Gallus gallus egg-white lysozyme C (HEL/HEWL)Surface Plasmon Resonance10mM HEPES, 0.15 M NaCl, 3.4mM EDTA, 0.005% surfactant P202987.416446445 (Table 2, p. 1850)9.50E-09-10.94
763NGBA:BCHIV-1 envelope glycoprotein gp160 subunit gp120Human antibody IgG VRC01Ag-AbSurface Plasmon Resonance10mM HEPES, 150mM NaCl, 3mM EDTA, and 0.05% surfactant P-202937.420616231 (Supporting Online Material, Table S10a, p.41)5.76E-09-12.33
771GC1G:CHIV-1 envelope glycoprotein gp160 subunit gp120Human T-cell surface glycoprotein CD4Binding with 125I-labelled recombinant gp1202402498 (Table 1, p.7151)3.60E-09
782J0TA:DHuman 72 kDa type IV collagenase/matrix metalloproteinase-2 (MMP-2)Human metalloproteinase inhibitor 1/tissue inhibitor of metalloproteinases 1 (TIMP-1)EIFluorescence50mM Tris-HCl, 0.15 M NaCl, 10mM CaCl2, and 0.02% Brij 353107.512515831 (Table II, p. 9833)4.00E-10-13.33
791B41A:BHuman acetylcholinesterase (AChE)Dendroaspis angusticeps fasciculin-2 (fas-2)EIEnzyme activity assay using the colorimetric detection of AChE product50 mM phosphate buffer, 0.1 mg/ml BSA, 0.025% NaN3 (0.15 M) 298824613488 (Table 1, p. 639-40)9.40E-11-13.67
801KACA:BHuman adenovirus A serotype 12 fiber protein (ad12 knob)Human coxsackie virus and adenovirus receptor (CAR)RCFluorescence Anisotropy/Polarization10mM Tris-HCl, 0.1mM EDTA, 0.0125% Nonidet P-40298812716886 (Table 1, p. 26211)2.90E-07-8.91
81Human adenovirus A serotype 2 fiber protein (ad2 knob)Human coxsackie virus and adenovirus receptor (CAR)RCFluorescence Anisotropy/Polarization10mM Tris-HCl, 0.1mM EDTA, 0.0125% Nonidet P-40298812716886 (Table 1, p. 26211)3.50E-08-10.17
822J12A:BHuman adenovirus D37 fiber proteinHuman coxsackie virus and adenovirus receptor (CAR)RCSurface Plasmon Resonance10mM HEPES, 150mM NaCl, 3mM EDTA, 0.005% P20 detergent2987.416923808 (Figure 6, p. 33713)2.00E-08-10.5
831A4YA:BHuman angiogeninHuman ribonuclease inhibitor, placental (hRI)EImeasurement of dissociated ligand at various times0.1 M Mes, 0.1 M NaCl, 1 mM EDTA298610413501 (Table 2, p. 9278)3.90E-16-21.01
841A4YA:BHuman angiogeninHuman ribonuclease inhibitor, placental (hRI)EIStopped-flow Fluorescence; Competitive Inhibition0.1 M Mes, 0.1 M NaCl, 1mM EDTA, 120µM DTT298610970748 ( Table 2, p. 503, Table 3, p. 504, Tables 4 and 5, p. 508)5.40E-16-20.82
851A4YA:BHuman angiogeninHuman ribonuclease inhibitor, placental (hRI)EIHPLC quantitation of free angiogenin at various times0.1 M Mes, 0.1 M NaCl, 1mM EDTA29861281426 (Table VI, p. 12482)7.10E-16-20.66
861A4YA:BHuman angiogeninHuman ribonuclease inhibitor, placental (hRI)EIHPLC quantitation of free angiogenin at various times0.1 M Mes, containing 0.1 M NaCl, 1 mM EDTA, 120 µM DTT29862479414 (Interaction of H13A- and H114A-Angiogenin with Placental Ribonuclease Inhibitor, p. 7404)3.30E-16-21.11
871A4YA:BHuman angiogeninHuman ribonuclease inhibitor, placental (hRI)EIHPLC quantitation of free angiogenin at various times0.1 M Mes, 0.1 M NaCl, 1mM EDTA29862742853 (Table I, p.3558)7.10E-16-20.66
881A4YA:BHuman angiogeninHuman ribonuclease inhibitor, placental (hRI)EIHPLC quantitation of free angiogenin at various times for complexes with native hRI; Scintillation counting of free and bound radiolabeled [14C]Ang for hRI mutants0.1 M Mes, containing 0.1 M NaCl, 1 mM EDTA, 120 µM DTT, 100 µg/mL BSA29869050852 (Table 4, p. 1765)3.90E-16-21.01
892AJFA:EHuman angiotensin-converting enzyme 2/ACE-related carboxypeptidaseHuman SARS coronavirus spike S glycoproteinRCSurface Plasmon Resonance0.01 M HEPES, 0.15 M NaCl, 3mM EDTA, 0.005% v/v Surfactant P202987.415791205 (Table I, p. 1639)1.62E-08-10.62
903BDYV:LHHuman bH1-44 antibody (anti-HER2/anti-VEGF dual-specific antibody)Human vascular endothelial growth factor A (VEGF A)Ag-AbSurface Plasmon ResonancePBS with 0.05% Tween 2030321526167 (Fig.2A on 4th page)3.30E-09-11.76
913BK3A:CHuman bone morphogenetic protein-2 (BMP-2)Danio rerio crossveinless 2 (cv2)Surface Plasmon Resonance29818477456 (Table 1, p. 745)2.20E-08-10.44
921REWAB:CHuman bone morphogenetic protein-2 (BMP-2)Human bone morphogenetic protein receptor type-1A (BMPR-1A)RCSurface Plasmon Resonance10mM HEPES, 500mM NaCl, 3.4mM EDTA, 0.005% surfactant P202987.410880444 (Table 1, p. 3319)6.67E-10-12.51
931REWAB:CHuman bone morphogenetic protein-2 (BMP-2)Human bone morphogenetic protein receptor type-1A (BMPR-1A)RCSurface Plasmon Resonance10 mM Hepes, 500 mM NaCl, 3.4 mM EDTA, 0.005% Surfactant P202987.415064755 (Table 2, p. 484)9.00E-10-12.33
941REWAB:CHuman bone morphogenetic protein-2 (BMP-2)Human bone morphogenetic protein receptor type-1A (BMPR-1A)RCSurface Plasmon Resonance10mM HEPES, 500mM NaCl, 3.4mM EDTA, 0.005% surfactant P202987.418160401 (Table 2, p. 5884)7.00E-10-13.1
95Human C-C motif chemokine 11 (eotaxin-1)Rabbitpox viral CC chemokine inhibitor (35K)Fluorescence Anisotropy/Polarization20 mM potassium phosphate, 100 mM NaCl298724482230 (able 1, p. 6598)6.50E-10-12.53
961GRNA:BHuman cell division control protein 42 homolog (CDC42)Human Rho GTPase-activating protein 1/CDC42 GTPase-activating protein (p50-RhoGAP)GCmonitoring the nucleotide-sensitive fluorescence from Trp97 of Cdc42Hs20mM Hepes-NaOH, 5mM MgCl2, 100mM NaCl2987.59632678 (Table 1, p. 16212)2.90E-06-7.55
972GOXA:BHuman complement C3Staphylococcus aureus fibrinogen-binding protein efbSurface Plasmon Resonance10 mM sodium phosphate, 150 mM sodium chloride, 0.005% Tween-20298818687868 (Table 2, p. 1899)1.40E-09-12.07
982GOXA:BHuman complement C3Staphylococcus aureus fibrinogen-binding protein efbIsothermal Titration Calorimetry20mM Tris, 200mM NaCl298818687868 (Table 2, p. 1899)2.00E-09-11.86
992NOJA:BHuman complement C3Staphylococcus aureus fibrinogen-binding protein efb homolog EhpIsothermal Titration Calorimetry20mM Tris, 200mM NaCl298817699522 (Table 1, p. 30056)1.80E-10-13.29
1002HLEA:BHuman ephrin type-B receptor 4Human ephrin-B2RCIsothermal Titration Calorimetry50mM Tris-Cl, 150mM NaCl, 1mM CaCl22987.816867992 (Table 3, p. 28191)4.00E-08-10.09
101Human fibroblast growth factor receptor substrate 2/signaling adaptor SNT-1Human high affinity nerve growth factor receptor/neurotrophic tyrosine kinase receptor type 1 (Trk-A)Isothermal Titration Calorimetry50mM Na2PO4, 200mM NaCl298711877385 (Table I, p. 17090)7.70E-06-6.97
102Human fibroblast growth factor receptor substrate 2/signaling adaptor SNT-1Human high affinity nerve growth factor receptor/neurotrophic tyrosine kinase receptor type 1 (Trk-A)Isothermal Titration Calorimetry20mM Tris-HCl, 200mM NaCl298811877385 (Table I, p. 17090)1.53E-05-6.57
1031GCQAB:CHuman growth factor receptor-bound protein 2 (GRB2)Mouse proto-oncogene Vav1, SH3 domainSurface Plasmon Resonance10mM HEPES, 150mM NaCl, 3mM EDTA, 0.005% (v/v) polysorbate 20, 2.5mM 2-mercaptoethanol2987.411406576 (Table III, p. 3003)1.68E-05-6.51
104Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 1 (mAb 1)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-13.1
105Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 10 (mAb 10)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-10.6
106Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 11 (mAb 11)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-12.2
107Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 12 (mAb 12)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-13.1
108Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 13 (mAb 13)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-12.6
109Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 14 (mAb 14)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-13.5
110Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 15 (mAb 15)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-12.7
111Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 16 (mAb 16)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-13.1
112Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 17 (mAb 17)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-12.8
113Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 18 (mAb 18)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-12.85
114Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 19 (mAb 19)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-13.1
115Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 2 (mAb 2)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-13.1
116Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 20 (mAb 20)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-13.1
117Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 21 (mAb 21)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-12.45
118Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 3 (mAb 3)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-13.1
119Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 4 (mAb 4)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-11.2
120Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 5 (mAb 5)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-14.2
121Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 6 (mAb 6)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-10.8
122Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 7 (mAb 7)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-13.1
123Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 8 (mAb 8)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-10.1
124Human growth hormone/somatotropin (hGH)anti-hGH mouse monoclonal antibody 9 (mAb 9)Ag-AbRobot-aided enzyme-linked immunoabsorbant assay50 mM Tris, 0.15 M NaCl, 2 mM EDTA, 5 mg/mL BSA (in 0.05% (w/v) Tween 20 and 0.02% (w/v) sodium azide)2987.51380563 (Table 4, p. 855-6)-10.1
1251A22A:BHuman growth hormone/somatotropin (hGH)Human growth hormone receptor (hGHR)HRCompetitive displacement of 125I-labeled hGH50 mM Tris-HCl, 10 mM CaCl2, 0.1% BSA, 0.02% NaN32987.42014261 (Table 2, p. 3409)4.60E-10-12.73
1261A22A:BHuman growth hormone/somatotropin (hGH)Human growth hormone receptor (hGHR)HRCompetitive displacement of 125I-labeled hGH50 mM Tris-HCl, 10 mM CaCl2, 0.1% BSA, 0.02% NaN3, 50 µM ZnCl2, 10 mM MgCl22987.42014261 (Table 4, p. 3409)4.40E-10-12.76
1271A22A:BHuman growth hormone/somatotropin (hGH)Human growth hormone receptor (hGHR)HRCompetitive displacement of 125I-labeled hGH50 mM Tris-HCl, 10 mM CaCl2, 1 g/L BSA, 0.2 g/L NaN32987.42034689 (Table 1, p. 4499)4.00E-10-12.81
1281A22A:BHuman growth hormone/somatotropin (hGH)Human growth hormone receptor (hGHR)HRCompetitive displacement of 125I-labeled hGH50 mM Tris-HCl, 10 mM CaCl2, 1 g/L BSA, 0.2 g/L NaN32987.42471267 (Table 1, p. 1082)3.40E-10-12.91
1291A22A:BHuman growth hormone/somatotropin (hGH)Human growth hormone receptor (hGHR)HRSurface Plasmon Resonance150 mM NaCl, 10 mM sodium phosphate, 0.02% Tween 202987.47504735 (Tables 1 and 2, pp. 556-7)9.00E-10-12.33
1301A22A:BHuman growth hormone/somatotropin (hGH)Human growth hormone receptor (hGHR)HRCompetitive Binding50mM Tris-HCl, 10mM CaCl2, 1g/L bovine albumin, 0.2 g/L NaN32987.47529940 (Figure 2, p. 384)9.63E-10-12.29
1311A22A:BHuman growth hormone/somatotropin (hGH)Human growth hormone receptor (hGHR)HRSurface Plasmon ResonancePBS with 10mM sodium phosphate, 137mM NaCl, 2.7mM KCl, 0.05% Tween 202987.28756685 (Table 2, p. 10303)2.90E-09-11.64
1321A22A:BHuman growth hormone/somatotropin (hGH)Human growth hormone receptor (hGHR)HRcompetitive displacement of hGH from hGHbp, using 125I-labeled hGH as a tracerPBS with 0.02% (v/v) Tween 202989571026 (Table 1, p. 1118)3.40E-10-12.91
1331BP3A:BHuman growth hormone/somatotropin (hGH)Human prolactin receptor (hPRL-R)HRCompetitive displacement of 125I-labeled hGH50 mM Tris-HCl, 10 mM CaCl2, 0.1% BSA, 0.02% NaN3, 50 µM ZnCl2, 10 mM MgCl22987.42014261 (Table 2, p. 3409)3.30E-11-14.29
1341BP3A:BHuman growth hormone/somatotropin (hGH)Human prolactin receptor (hPRL-R)HRCompetitive displacement of 125I-labeled hGH50 mM Tris-HCl, 10 mM CaCl2, 0.1% BSA, 0.02% NaN3, 1 mM EDTA2987.42014261 (Table 3, p. 3409)2.70E-07-8.96
1351FYTAB:CHuman HLA class II histocompatibility antigen DR (MHCII HLA-DR)Influenza A virus hemagglutininCompetitive Peptide Binding Assay0.1% BSA, 0.01% Tween 20, 0.1 mg/mL 4-(2-aminoethyl)-benzene sulfonyl fluoride 0.1mM iodoacetamide, 5mM EDTA, 0.02% NaN33107.215823020 (Table 1, p. 5618)8.53E-08-10.03
1361FCCA:CHuman Ig gamma-1 chain C region (IgG1 MO61) FcStreptococcus sp. group G immunoglobulin G-binding protein GAg-AbFluorescence20mM phosphate298610452608 (Table 1, p. 1644)2.40E-07-9.03
1374OGAAB:EHuman insulin receptor, soluble (sHIR)Human insulinHRMicrotiter Plate Antibody Capture Assay2777852381 (Table I, p.3014)1.41E-09-11.22
1384OGAAB:EHuman insulin receptor, soluble (sHIR)Human insulinHRMicrotiter Plate Antibody Capture Assay137.5mM NaCl, 10mM magnesium sulfate, 20 mM Hepes, 0.5% BSA (w/v), 0.025% Triton X-100 (v/v), and 0.02% sodium azide (w/v)2777.88576204 (Table I, p. 2441)5.60E-10-11.73
1394XSSB:EHuman insulin-like growth factor I (IGF-I)Human insulin receptor (IR)HRSurface Plasmon Resonance10mM HEPES, 150mM NaCl, 3.4mM EDTA, 0.05% P202987.49733769 (Table II, p. 24704)5.78E-09-11.23
1401WQJI:BHuman insulin-like growth factor I (IGF-I)Human insulin-like growth factor-binding protein-1 (IGFBP-1)Surface Plasmon Resonance10mM HEPES, 150mM NaCl, 3.4mM EDTA, 0.05% P202987.49733769 (Table II, p. 24704)4.14E-10-12.79
1411MQ8A:BHuman integrin αLβ2Human intercellular adhesion molecule 1 (ICAM-1)Surface Plasmon ResonanceTris buffer with 1mM MgCl229812526797 (Table 1, p. 100)1.50E-03-3.85
1421MQ8A:BHuman intercellular adhesion molecule 1 (ICAM-1)Human integrin alpha-L (LFA-1A)Surface Plasmon ResonanceTris-buffered saline with 1mM MgCl229812526797 (Table 1, p. 100)3.00E-06-7.53
143Human interleukin-18 (hIL-18)Human interleukin-18 binding protein (hIL-18BP)Surface Plasmon Resonance0.01 M Hepes, 0.15 M NaCl, 3mM EDTA, 0.1% Tween 202987.411278524 (Table 1, p. 17385)6.00E-11-13.94
1442B5IA:BDHuman interleukin-2 (hIL-2)Human interleukin-2 receptor alpha-beta complex (hIL-2R/p55-p70)RCDirect binding with radiolabeled Na125I2052547 (Table 2, p. 4638)5.40E-11
1452B5IA:BHuman interleukin-2 (hIL-2)Human interleukin-2 receptor beta (hIL-2Rb)RCDirect binding with radiolabeled Na125I2052547 (Table 2, p. 4638)3.60E-10
1461IARA:BHuman interleukin-4 (hIL-4)Human interleukin-4 receptor alpha (hIL-4Ra)RCSurface Plasmon Resonance10mM HEPES, 150mM NaCl2987.411786020 (Table 1, p. 400)1.50E-10-13.40
1471IARA:BHuman interleukin-4 (hIL-4)Human interleukin-4 receptor alpha (hIL-4Ra)RCSurface Plasmon Resonance10mM Hepes, 150mM NaCl, 3.4mM EDTA, 0.005% surfactant P202987.49050834 (Table 1, p. 1658)1.62E-10-13.35
1483BPLAB:CHuman interleukin-4 (IL-4) with interleukin-4 receptor (IL-4R)Cytokine receptor common subunit gammaRCSurface Plasmon Resonance10mM Hepes, 150mM NaCl, 3.4mM EDTA, 0.005% surfactant P202987.49799097 (Table 1, p. 15)3.44E-06-7.45
1491ILQAB:CHuman interleukin-8 (hIL-8)Human interleukin-8 receptor (hIL-8R)RCBinding measured using 125I-IL-825mM Hepes, 0.5% BSA, HBSS without Mg2+ or Ca2+2777.28034699 (Table I, p. 19344)3.03E-09-10.8
1501ILQAB:CHuman interleukin-8 (hIL-8)Human interleukin-8 receptor (hIL-8R)RCBinding measured using 125I-IL-82778103045 (Table 2, p. 18551)9.70E-10-11.42
151Human leptinHuman leptin receptorHRSurface Plasmon Resonance0.01 M HEPES, 0.15 M NaCl, 3mM EDTA, 0.005% v/v Surfactant P202987.424743494 (Table 1, p. 4)6.47E-11-13.89
1521EAWA:BHuman membrane-type serine protease 1/suppressor of tumorigenicity 14 protein (matriptase/MT-SP1)Bovine pancreatic trypsin inhibitor (BPTI)EIFluorescence50mM Tris-HCl, 50mM NaCl, 0.01% (v/v) Tween-202988.817475279 (Table 2, p. 1046)4.97E-11-14.05
1533BN9B:CDHuman membrane-type serine protease 1/suppressor of tumorigenicity 14 protein (matriptase/MT-SP1)Human Ig heavy chain V-III region 23 (E2 Fab)Ag-AbStopped-flow Spectroscopy29817475279 (Table 2, p. 1046)1.23E-11-14.88
1543NPSA:BCHuman membrane-type serine protease 1/suppressor of tumorigenicity 14 protein (matriptase/MT-SP1)Human S4 FabAg-AbStopped-flow Spectroscopy29817475279 (Table 2, p. 1046)7.04E-11-13.84
1552VLJAC:DEHuman MHCI-A2/Infuenza A virus matrix peptide complexHuman T-cell receptor JM22 Vβ17Surface Plasmon Resonance10mM HEPES, 150mM NaCl, 3.4mM EDTA, and 0.005% Surfactant P202987.418275829 (Table 2, p. 176, Table 3, p. 177)5.20E-06-7.21
1561PPFE:IHuman neutrophil elastase (elastase-2/HLE)Meleagris gallopavo (turkey) ovomucoid (OMTKY3)EISpectroscopy0.1 M Tris-HCl, 0.005% Triton X-100, 0.02 M CaCl22948.311171964 (data previously accessible online here, please check SKEMPI Notes for details on the data source)1.64E-10-13.16
1571PPFE:IHuman neutrophil elastase (elastase-2/HLE)Meleagris gallopavo (turkey) ovomucoid (OMTKY3)EISpectroscopy0.1 M Tris-HCl, 0.025% Triton X-100, 0.02 M CaCl22948.312767228 (Tables 1 and 2, p. 6462, Table 3, p. 6463)1.53E-10-13.2
1581PPFE:IHuman neutrophil elastase (elastase-2/HLE)Meleagris gallopavo (turkey) ovomucoid (OMTKY3)EITitration0.1 M Tris-HCl, 0.005% Triton X-100, 0.02 M CaCl22948.39047374 (Table 1, p. 443)1.64E-10-13.16
1591PPFE:IHuman neutrophil elastase (elastase-2/HLE)Meleagris gallopavo (turkey) ovomucoid (OMTKY3)EI294Stephen Ming-teh Lu, PhD Thesis, Purdue University, 2000 (See SKEMPI for data source)1.64E-10-13.16
1602J0TA:DHuman nterstitial collagenase/matrix metalloproteinase-1 (MMP-1)Human metalloproteinase inhibitor 1/tissue inhibitor of metalloproteinases 1 (TIMP-1)EIactivity measured by following release of fluorogenic product with time50mM Tris-HCl, 0.15 M NaCl, 10mM CaCl2, 0.02% Brij 353107.59268350 (Table II, p. 22089)1.50E-09-12.52
1611AK4A:DHuman peptidyl-prolyl cis-trans isomerase A/cyclophilin A (CypA)HIV-1 gag-pol polyprotein/capsid protein (CA)Surface Plasmon Resonance100mM NaCl, 25mM potassium phosphate, 1mM β-mercaptoethanol, 0.005% (v/v) P202936.59223641 ( Table 2, p. 787)1.20E-06-7.94
162Human peptidyl-prolyl cis-trans isomerase A/cyclophilin A (hCypA)Human SARS coronavirus nucleocapsid protein (NP)Surface Plasmon Resonance10mM Hepes, 150mM NaCl, 3.4mM EDTA, 0.005% (v/v) surfactant P202987.415358143 (Table 1, p. 561)6.04E-09-11.21
1632C0LA:BHuman peroxisomal targeting signal 1 receptor/peroxin-5 (PEX5) TPR domainHuman non-specific lipid-transfer protein/sterol carrier protein 2 (NSL-TP/SCP-2)Isothermal Titration Microcalorimetry100mM potassium phosphate, 1mM DTT3087.417157249 (Table 1, p. 655)1.09E-07-9.81
1641HE8A:BHuman phosphatidylinositol 4,5-bisphosphate 3-kinase (PI3K)Human GTPase HRasOEFluorescence Anisotropy/Polarization20mM Tris, 2mM MgCl2, 1mM DTT2937.511136978 (Figure 2, p. 933)1.30E-06-7.89
1651DANTU:LHHuman plasma coagulation factor VIIaHuman tissue factor/thromboplastinOESurface Plasmon Resonance20mM Tris-HCl, 100mM NaCl, 5mM CaC122987.57654692 (Figure 4, pp. 10387)6.16E-09-11.2
1661DANTU:LHHuman plasma coagulation factor VIIaHuman tissue factor/thromboplastinOEEnzyme-Linked Functional Assay20mM HEPES, 130mM NaCl, 5mM CaC12, 0.5% BSA3107.47756258 (Table 2, p.6312)2.60E-12-16.43
1671DANTU:LHHuman plasma coagulation factor VIIaHuman tissue factor/thromboplastinOEELISA2777947809 (Table 3, p. 14008)5.30E-09-10.49
1681DANTU:LHHuman plasma coagulation factor VIIaHuman tissue factor/thromboplastinOELinked Chromogenic Assay5mM Ca2+3108312277 (Figure 3, p.1569)4.10E-12-16.15
1691DANTU:LHHuman plasma coagulation factor VIIaHuman tissue factor/thromboplastinOESurface Plasmon Resonance10mM Hepes, 150mM NaCl, 5mM CaCl2, 1mM CHAPS, 0.005% surfactant P202957.48962059 (Table 1, p. 14382)3.70E-09-11.38
170Human prohibitin-2 (PHB2/REA)Human estrogen receptor alpha (ER-α)RCIsothermal Titration Calorimetry20 mM HEPES-NaOH, 150 mM NaCl, 5% glycerol, 0.5 mM TCEP298826049107 (Table 1, p. 729)1.30E-06-8.03
171Human protein-glutamine gamma-glutamyltransferase 2/transglutaminase-2 (TG2)Human fibronectin (FN)Surface Plasmon Resonance0.01 M Hepes, 0.15 M NaCl, 3 mM EDTA, 0.005 % surfactant P202987.427394141 (Table I on the 8th page)9.00E-10-12.33
1721GUAA:BHuman RAF proto-oncogene serine/threonine-protein kinase (c-Raf)Human Ras-related protein Rap-1AIsothermal Titration Calorimetry50mM Tris-HCl, 5mM MgCl2, 100mM NaCl2987.415236966 (Tables 3, 4 and 6, pp. 1046, 1047 and 1051 respectively)4.90E-07-8.6
1731LFDAC:BDHuman Ral guanine nucleotide dissociation stimulator (RalGDS)Human GTPase HRasIsothermal Titration Calorimetry50mM Tris-HCl, 5 mM MgCl22987.415236966 (Tables 3, 4 and 6, pp. 1046, 1047 and 1051 respectively)6.90E-07-8.4
1741LFDAC:BDHuman Ral guanine nucleotide dissociation stimulator (RalGDS)Human GTPase HRasFluorescence50mM Tris-HCl, 5 mM MgCl23107.415236966 (Tables 3, 4 and 6, pp. 1046, 1047 and 1051 respectively)1.20E-06-8.4
175Human Ral guanine nucleotide dissociation stimulator (RalGDS)Human Ras-related protein Rap-1AIsothermal Titration Calorimetry50mM Tris-HCl, 5 mM MgCl22987.415236966 (Tables 3, 4 and 6, pp. 1046, 1047 and 1051 respectively)5.50E-08-9.9
1761E96A:BHuman ras-related C3 botulinum toxin substrate 1 (Rac-1)Human neutrophil cytosol factor 2 (p67phox, NCF2)Fluorescence spectrophotometric assay20mM Tris acetate buffer with 3mM NaCl, 50mM KCl, 0.1 µm MgCl22937.459228059 (Table 1, p. 18837)1.24E-07-9.26
1772A9KA:BHuman ras-related protein Ral-AClostridium botulinum D phage mono-ADP-ribosyltransferase C3/exoenzyme C3Isothermal Titration Calorimetry20mM Tris-HCl, 50mM NaCl, 2mM MgCl2, 2mM DTE3107.516177825 (Table 1, p. 3671)6.00E-08-10.24
178Human ras-related protein Ral-BHuman exocyst complex component 2 (Sec5)GCScintillation Proximity Assay20 mM Tris-HCl, 2 mM MgCl2, 1 mM DTT, 0.2 mg/mL BSA7.525621740 (Table 3, p. 1385)2.38E-07
1792KWIA:BHuman ras-related protein Ral-BHuman ralA-binding protein 1 (RalBP1)GCScintillation Proximity Assay20 mM Tris-HCl, 2 mM MgCl2, 1 mM DTT, 0.2 mg/mL BSA7.525621740 (Table 3, p. 1385)2.16E-07
1804OZ1AB:CHuman RNA-binding protein 39 (CAPER-α)Human splicing factor 3B subunit 1 (SF3b155)Isothermal Titration Calorimetry50 mM NaCl, 25 mM HEPES, 0.2 mM TCEP3037.424795046 (Table 2, p.17330)5.80E-08-10.03
1811E50A:BHuman runt-related transcription factor 1/core-binding factor alpha (CBF-α)Human core binding factor beta (CBF-β)Electrophoretic Mobility Shift Assay10984496 (Table III, p. 39584)4.50E-080
1821E+50A:BHuman runt-related transcription factor 1/core-binding factor alpha (CBF-α)Human core binding factor beta (CBF-β)Electrophoretic Mobility Shift Assay27312807883 (Table III and IV, p. 33101)1.40E-08-9.81
1831UEAA:BHuman stromelysin-1/matrix metalloproteinase-3 (MMP-3)Human metalloproteinase inhibitor 1/tissue inhibitor of metalloproteinases 1 (TIMP-1)EIFluorescence50mM Tris-HCl, 0.15 M NaCl, 10mM CaCl2, and 0.02% Brij 353107.512515831 (Table II, p. 9833)2.00E-10-13.76
1841AO7AC:DEHuman T-cell receptor A6Human HLA class I histocompatibility antigen, A-2 alpha chain with protein TAX-1 (TAX-HLAA2)Ag-AbSurface Plasmon Resonance0.01 M HEPES, 0.15mM NaCl, 3mM EDTA, and 0.005% (v/v) Surfactant P202987.420681514 (Table 1, p. 7052)2.10E-06-7.74
1851AO7AC:DEHuman T-cell receptor A6Human HLA class I histocompatibility antigen, A-2 alpha chain with protein TAX-1 (TAX-HLAA2)Ag-AbSurface Plasmon Resonance0.01 M Hepes, 0.15mM NaCl, 3mM EDTA and 0.005% (v/v) Surfactant P202987.424380763 (Table 2, p.1591)2.20E-06-7.71
186Human tetranectin (TN)Human plasminogen (kringle 4 protein domain)Surface Plasmon Resonance50mM Tris-HCl, 0.1 M NaCl, 0.005% Surfactant P2029889786936 (Table II, p. 29244)5.50E-07-8.54
187Human tetranectin (TN)Human plasminogen (kringle 4 protein domain)Surface Plasmon Resonance50mM Tris-HCl, 500mM NaCl29889786936 (Table II, p. 29244)5.50E-07-8.54
1881KTZA:BHuman transforming growth factor beta 3 (TGF-β3)Human TGF-beta receptor type-2 (TGFR-2)RCSurface Plasmon Resonance20mM Hepes, 150mM NaCl, 3.4mM EDTA, 0.005% Tween-202987.416300789 (Table 1, p. 53)3.20E-07-8.86
1891KTZA:BHuman transforming growth factor beta 3 (TGF-β3)Human TGF-beta receptor type-2 (TGFR-2)RCSurface Plasmon Resonance10mM HEPES, 150mM NaCl, 3.4mM EDTA, 0.005% Tween 202987.419161338 (Table 1, p. 2150)7.30E-08-9.73
1901S1QA:BHuman tumor susceptibility gene 101 protein (Tsg101)Human polyubiquitin-CSurface Plasmon Resonance20mM sodium phosphate, 150mM NaCl, 0.05% BSA, 0.01% P202937.212006492 (Table II, p.2401)6.35E-04-4.29
1911XD3A:BHuman ubiquitin carboxyl-terminal hydrolase isozyme L3 (UCH-L3)Human polyubiquitin-CCompetitive Inhibition50mM Tris-HCl, 10mM DTT3107.510518943 (Table 1, p. 1071)3.00E-07-9.25
1922OOBA:BHuman ubiquitin protein ligase Cbl-bHuman polyubiquitin-CFluorescence titration29818596201 (Table 2, p. 1813)5.31E-05-5.83
1931C4ZA:DHuman ubiquitin-conjugating enzyme E2 L3 (UbcH7)Human ubiquitin-protein ligase E3A (E6AP)OEFluorescence Anisotropy/Polarization20mM KH2PO4, 150mM NaCl, 5mM β-ME298717433363 (Table 1, p. 422)5.00E-06-7.23
194Human UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase (GNE)Human alpha-actinin 1Surface Plasmon Resonance20mM Tris, 100-300mM NaCl, 0.1mM DTT, 2mM CaCl22987.518560563 (Table 2, 5th page)6.80E-08-13.05
195Human UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase (GNE)Human alpha-actinin 2Surface Plasmon Resonance20mM Tri, 250mM NaCl, 0.1mM DTT, 2 mM CaCl23987.527023225 (Figure 2 on the 5th page)9.37E-09-14.62
1962I9BA:EHuman urokinase plasminogen activator receptor (uPAR)Human single chain urokinase-type plasminogen activator (scuPA)RCSurface Plasmon ResonancePBS with 0.005% Tween 202987.410864923 (Table III, p. 28536)9.10E-10-12.33
1972I9BA:EHuman urokinase plasminogen activator receptor (uPAR)Human single chain urokinase-type plasminogen activator (scuPA)RCSurface Plasmon ResonancePBS with 0.005% Tween 202987.410864923 (Tables II and III, p. 28535-6)3.30E-10-12.93
198Human vascular endothelial growth factor A (VEGF A)Human vascular endothelial growth factor receptor 2 (VEGFR-2)/kinase insert domain receptor (KDR)Ag-AbRadioimmunoassayPBS, 0.5% BSA, 0.1% Tween 209207067 (Tables 2 and 3, p. 7195)-14.7
1991BJ1W:LHHuman vascular endothelial growth factor A (VEGF A)Humanized mouse antibody mAb A4.6.1Ag-AbRadioimmunoassayPBS, 0.5% BSA, 0.1% Tween 209207067 (Tables 2 and 3, p. 7195)3.41E-09-16.01
2001CZ8V:LHHuman vascular endothelial growth factor A (VEGF A)Mouse antibody Y0192/humanized anti-VEGF Fab-12Ag-AbSurface Plasmon ResonancePBS with 0.05% Tween 2029810543973 (Table 6, p. 870)2.90E-09-11.64
2013F1SA:BHuman vitamin-K dependent protein ZHuman protein Z-dependent protease inhibitor (ZPI/serpin A10)EICompetitive binding titrationsTris buffer, 0.1 M NaCl2987.125713144 (Table 2, p. 9911)2.10E-09-11.83
202Humanized mouse monoclonal antibody Fab (mAb hu4D5-5)Human epidermal growth factor receptor 2 (EGFR-2/HER2)Ag-AbSurface Plasmon Resonance20mM sodium phosphate, 0.1 M NaCl, 0.05% Tween 202987.57687461 (Table 1, p.6831)2.70E-10-13.05
2031YY9A:CDHuman-mouse monoclonal antibody C225 gamma 1 Fab (cetuximab)Human epidermal growth factor receptor 2 (EGFR-2/HER2)Ag-AbSurface Plasmon Resonance0.01 M Hepes, 0.15mM NaCl, 3mM EDTA and 0.005% (v/v) Surfactant P202987.424380763 (Table 4, p. 1593)1.31E-09-12.11
2041NMBN:LHInfluenza A virus neuraminidase subtype N9Mouse antibody NC10 FabAg-AbSurface Plasmon Resonance10mM HEPES, 0.15 M NaCl, 3.4mM EDTA, 0.005% surfactant P202987.49579662 (Table IV, p. 71)4.55E-08-10.01
2051NCAN:LHInfluenza A virus neuraminidase subtype N9Mouse Ig gamma-2A chain C region/antibody NC41 scFvAg-AbFluorescence Quenching AssayPBS2987.29692956 (Table 2, p. 10667)5.00E-08-9.96
2063N4IA:BKlebsiella pneumoniae beta-lactamase SHV-1Streptomyces clavuligerus beta-lactamase inhibitor protein (BLIP)EISpectroscopy50 mm phosphate buffer with 1 mg/ml BSA298715284234 (Table II, p. 42862)1.13E-06-8.11
2072G2UA:BKlebsiella pneumoniae beta-lactamase SHV-1Streptomyces clavuligerus beta-lactamase inhibitor protein (BLIP)EINitrocefin indicator to measure hydrolysis10mM sodium PBS with 1 mg/ml BSA2987.416809340 (Table 1, p. 26746)1.25E-06-8.05
2083C4PA:BKlebsiella pneumoniae beta-lactamase SHV-1Streptomyces clavuligerus beta-lactamase inhibitor protein (BLIP)EIsodium PBS with 100 g/ml BSA18775544 (Table 3, p. 1269)1.72E-06
2091SBBA:BMouse 14.3.D T-cell antigen receptorStaphylococcus aureus enterotoxin type B (SEB)Sedimentation equilibrium using analytical centrifugation or surface plasmon resonance50 mM Tris-HCl2987.59500785 (Table 1, p. 826)1.40E-04-5.25
2101JCKAC:BDMouse 14.3.D T-cell antigen receptorStaphylococcus aureus enterotoxin type C-3 (SEC3)Surface Plasmon Resonance150mM NaCl, 10mM Na-Hepes, 3.4mM EDTA, 0.005% Surfactant P202987.510704464 (Table 1, p. 840)1.85E-07-9.18
2112DVWA:BMouse 26S proteasome non-ATPase regulatory subunit 10 (gankyrin)Human 26S protease regulatory subunit 6BOEIsothermal Titration Calorimetry20 mM sodium phosphate, 150 mM NaCl, 2.5 mM 2-mercaptoethanol2987.425343477 (Table 1, p. 6858)6.73E-08-9.78
2121KU6A:BMouse acetylcholinesterase (AChE)Dendroaspis angusticeps fasciculin-2 (fas-2)EIMeasure of substrate hydrolysis after attaining equilibrium0.1 M NaPO4 buffer, with 0.01% BSA31078157652 (Table 1, p. 11235)2.30E-12-16.51
2132BDNA:LHMouse antibody 11K2 scFvHuman C-C motif chemokine 2/monocyte chemoattractant protein 1 (MCP-1)Ag-AbSurface Plasmon ResonancePBS 0.005% (v/v) Tween2029824475232 (Table 1 on 4th page)8.00E-10-12.4
2141VFBAB:CMouse anti-hen egg white lysozyme monoclonal antibody D1.3Gallus gallus egg-white lysozyme C (HEL/HEWL)Ag-AbSurface Plasmon Resonance150mM NaCl, 0.005% Surfactant P-20, 10mM Hepes2987.58703938 (Table 1, p. 9672)2.00E-08-10.5
2151KIRAB:CMouse anti-hen egg white lysozyme monoclonal antibody D1.3Gallus gallus egg-white lysozyme C (HEL/HEWL)Ag-AbIsothermal Titration Calorimetry0.15 M NaCl, 0.01 M Tris-HCl2987.28952503 (Table 3, p. 15498)3.85E-08-10.11
2161VFBAB:CMouse anti-hen egg white lysozyme monoclonal antibody D1.3Gallus gallus egg-white lysozyme C (HEL/HEWL)Ag-AbSurface Plasmon Resonance150mM NaCl, 0.005% Surfactant P-20, 3.4mM EDTA, 10mM Hepes2987.59609690 (Table II, p. 7985)1.25E-08-10.78
2171DVFAB:CDMouse anti-hen egg white lysozyme monoclonal antibody D1.3Mouse antibody E5.2Ag-AbSurface Plasmon Resonance150mM NaCl, 0.005% Surfactant P-20, 10mM Hepes2987.58703938 (Table 1, p. 9672)1.08E-08-10.86
2181DVFAB:CDMouse anti-hen egg white lysozyme monoclonal antibody D1.3Mouse antibody E5.2Ag-AbSurface Plasmon Resonance150mM NaCl, 0.005% Surfactant P-20, 3.4mM EDTA, 10mM Hepes2987.58993317 (Table 1, p. 52)1.08E-08-10.86
2193HFMY:LHMouse anti-lysozyme HyHEL-10 antibody IgG1 FabGallus gallus egg-white lysozyme C (HEL/HEWL)Ag-Abmonitoring the rate of recovery of active HEWL298710338006 (Appendix, pp. 966-7)2.87E-11-14.37
2203HFMY:LHMouse anti-lysozyme HyHEL-10 antibody IgG1 FabGallus gallus egg-white lysozyme C (HEL/HEWL)Ag-AbIsothermal Titration Calorimetry50mM phosphate buffer with 0.2 M NaCl3037.27629185 (Table III, p.18555)2.38E-09-11.96
2213HFMY:LHMouse anti-lysozyme HyHEL-10 antibody IgG1 FabGallus gallus egg-white lysozyme C (HEL/HEWL)Ag-AbCompetitive Inhibition Enzyme Assay0.1% BSA, 66mM potassium phosphate2986.247683415 (Table 1, p.3960)1.30E-10-13.48
2223HFMY:LHMouse anti-lysozyme HyHEL-10 antibody IgG1 FabGallus gallus egg-white lysozyme C (HEL/HEWL)Ag-AbCompetitive Inhibition66mM potassium phosphate 2986.249761467 (Table I, p. 1859)7.50E-11-13.81
2233HFMY:LHMouse anti-lysozyme HyHEL-10 antibody IgG1 FabGallus gallus egg-white lysozyme C (HEL/HEWL)Ag-AbCompetitive Inhibition66mM potassium phosphate 2986.249761468 (Table 1, p. 1870)7.00E-11-13.85
2241DQJAB:CMouse anti-lysozyme HyHEL-63 antibody IgG1 FabGallus gallus egg-white lysozyme C (HEL/HEWL)Ag-AbSurface Plasmon Resonance150mM NaCl, 0.005% Surfactant P-20, 10mM Hepes2987.510828942 (Table 8, p. 6308)2.78E-09-11.67
2251DQJAB:CMouse anti-lysozyme HyHEL-63 antibody IgG1 FabGallus gallus egg-white lysozyme C (HEL/HEWL)Ag-AbSurface Plasmon Resonance150mM NaCl, 0.005% Surfactant P-20, 10mM Hepes2987.512515535 (Table 2, p.15)2.78E-09-11.67
226Mouse bone morphogenetic protein receptor type-1A (BMPR-1A)Human recombinant bone morphogenetic protein 4 (BMP-4)RCSurface Plasmon Resonance10mM HEPES, 150mM NaCl, 3mM EDTA, 0.05% Tween202987.411241215 (Table I, p. 403)4.64E-08-10
2271AHWAB:CMouse Ig 5G9 FabHuman tissue factor/thromboplastinAg-AbCompetition assay5mM CaCl22989480775 (Table 4, p. 883)3.40E-09-11.55
2281JRHLH:IMouse Ig kappa chain C region (mAb A6)Human interferon gamma receptor (IFN-γ-R1)Ag-AbSurface Plasmon Resonance0.01 M HEPES, 0.15 M NaCl, 3mM EDTA, 0.005% v/v Surfactant P202987.411123892 (Table I, p. 15676)1.20E-08-10.8
2291JRHLH:IMouse Ig kappa chain C region (mAb A6)Human interferon gamma receptor (IFN-γ-R1)Ag-AbSurface Plasmon Resonance50mM sodium phosphate buffer, 150mM NaCl, 0.005% (v/v) Surfactant-p202987.29367779 (Table 1, p. 885)1.42E-08-10.7
2301JRHLH:IMouse Ig kappa chain C region (mAb A6)Human interferon gamma receptor (IFN-γ-R1)Ag-AbSurface Plasmon Resonance50mM sodium phosphate buffer, 150mM NaCl, 0.005 % (v/v) Surfactant p202987.29878445 (Table 1, p. 808)1.44E-08-10.69
2311JRHLH:IMouse Ig kappa chain C region (mAb A6)Human interferon gamma receptor (IFN-γ-R1)Ag-AbCompetition ELISA50mM sodium phosphate buffer, 150mM NaCl, 0.005 % (v/v) Surfactant p202987.29878445 (Table 3, p. 809)2.40E-09-11.75
232Mouse interleukin-18 (mIL-18)Human interleukin-18 binding protein (hIL-18BP)Surface Plasmon Resonance0.01 M Hepes, 0.15 M NaCl, 3mM EDTA, 0.1% Tween 202987.411278524 (Table 1, p. 17385)1.90E-11-14.62
233Mouse interleukin-2 (mIL-2)Human interleukin-2 receptor beta (hIL-2Rb)Cold ligand competition assay200 µL HBSS, 0.1% BSA2771600937 (Table I, p. 2048)3.00E-09-10.8IL receptor expressed in cos7 cells
234Mouse interleukin-2 (mIL-2)Human interleukin-2 receptor beta (hIL-2Rb)Cold ligand competition assay200 µL HBSS, 0.1% BSA2771600937 (Table II, p. 2051)3.00E-10-12.07IL receptor expressed in BAF3 clones
235Mouse interleukin-2 (mIL-2)Mouse high affinity interleukin-2 receptor (alpha/beta subunit, mIL-2R)RCBinding performed with 125I-labelled hIL-2 as 'hot' ligand; radioacitivity measured after separation of bound and free ligand100 µL HBSS, 0.1% BSA, 0.1% sodium azide3101396584 (Table III, p. 3908)1.50E-11-15.35
236Mouse interleukin-2 (mIL-2)Mouse high affinity interleukin-2 receptor (alpha/beta subunit, mIL-2R)RCBinding performed with 125I-labelled hIL-2 as 'hot' ligand; radioacitivity measured after separation of bound and free ligand100 µL HBSS, 0.1% BSA, 0.1% sodium azide3101396584 (Table III, p. 3908)6.00E-12-15.92
237Mouse interleukin-2 (mIL-2)Mouse high affinity interleukin-2 receptor (alpha/beta subunit, mIL-2R)RCCompetitive Binding100 µL HBSS, 0.1% BSA, 0.1% sodium azide3108262055 (Table II, p. 5115)2.50E-10-13.62
238Mouse interleukin-2 (mIL-2)Mouse low affinity interleukin-2 receptor (alpha subunit, mIL-2R)RCCompetitive Binding100 µL HBSS, 0.1% BSA, 0.1% sodium azide3108262055 (Table II, p. 5115)3.20E-09-12.05
2392JELP:HLMouse JEL42 antibody (Fab)Escherichia coli phosphocarrier protein/histidine-containing protein (HPr)Ag-AbCompetition solid-phase radioimmune assayPBS with 1% fetal calf serum2981711212 (Table 1, p.4879); wild-type binding affinity value: 9671548 (Abstract, p. 765);3.70E-09
2402O3BA:BNostoc sp. nuclease (nucA)Nostoc sp. sugar-non-specific nuclease inhibitor (nuiA)EIMeasurement of plasmid DNA cleavage using agarose gel assay50mM Tris-HCl, 50mM NaCl, 1mM EDTA, 0.01% Triton X-100, 0.01% BSA, 5mM MnCl2298717138564 (Table 3, p. 5688)3.20E-12-15.67
2414E6KA:GPseudomonas aeruginosa bacterioferritin/ferroxidase (bfrB)Pseudomonas aeruginosa bacterioferritin-associated ferredoxinOESurface Plasmon ResonancePBS with 1.5 mM TCEP2957.426368531 (Table 2, p. 6169)3.30E-06-7.4
2421F5RA:IRattus norvegicus anionic trypsin-2Bovine pancreatic trypsin inhibitor (BPTI)EIFluorescence100mM NaCl, 10mM CaCl2, and 50mM Hepes298811420435 (Table 1, p. 1334)4.40E-10-12.76
243Rattus norvegicus gap junction beta-1 protein/connexin-32 (Cx32)Bovine calmodulin (CaM)Isothermal Titration Calorimetry25mM Tris-HCl, 100mM KCl, 1mM β-ME, 5mM CaCl2310722718765 (Table 1, p. 27778)4.65E-06-7.56
2441LFDA:BRattus norvegicus Ral guanine nucleotide dissociation stimulator (RalGDS)Human GTPase HRasGCStopped-flow Fluorescence15mM Hepes, 5mM MgCl22987.415197281 (Table 2, supporting information)1.94E-06-7.79
245Rattus norvegicus T-cell surface antigen CD2Rattus norvegicus CD48 antigenSurface Plasmon Resonance150mM NaCl, 1mM CaCl2, 1mM MgCl2, 10mM Hepes, 0.005% Surfactant P-202987.49576909 (Table 1, p. 5491)8.00E-05-5.59
2462LHIASaccharomyces cerevisiae calmodulin (yCaM)Saccharomyces cerevisiae calcineurinSurface Plasmon Resonance20mM Tris/HCl with 1mM CaCl2, 250mM NaCl, 0.005% Tween 202987.59756868 (Table II, p. 23679)5.70E-08-9.88
2474NFGA:BSaccharomyces cerevisiae cytochrome c peroxidase, mitochondrial (CcP)Equus caballus cytochrome cOEIsothermal Titration Calorimetry0.010 M potassium phosphate buffer, 0.050 M KNO329869092837 (Table 1, p. 4056 and Table 2, p. 4059)1.00E-05-6.82
2482PCCA:BSaccharomyces cerevisiae cytochrome c peroxidase, mitochondrial (CcP)Saccharomyces cerevisiae cytochrome c iso-1OEIsothermal Titration Calorimetry50 mM Dimethylglutaric acid (DMG)298611148036 (Table I, p. 423)1.15E-06-8.1
2492HRKA:BSaccharomyces cerevisiae glutamate-tRNA ligase, cytoplasmicSaccharomyces cerevisiae tRNA-aminoacylation cofactor ARC1Surface Plasmon Resonance20mM Hepes, 150mM NaCl, 2mM EDTA, 0.005% Tween 202987.417976650 (Table 2, p. 1083, Table 3, p. 1084)5.30E-08-9.92
250Serratia marcescens carbapenem-hydrolyzing beta-lactamase SME-1Streptomyces clavuligerus beta-lactamase inhibitor protein (BLIP)EIhydrolysis of cephalosporin C using spectrophotometry50 mm phosphate buffer with 1 mg/ml BSA298712933802 (Table II, p. 45709)2.40E-09-11.75
251Serratia marcescens carbapenem-hydrolyzing beta-lactamase SME-1Streptomyces clavuligerus beta-lactamase inhibitor protein (BLIP)EISpectroscopy50 mm phosphate buffer with 1 mg/ml BSA298715284234 (Table II, p. 42862)2.40E-09-11.75
2521FC2C:DStaphylococcus aureus IgG-binding protein AHuman IgG1 MO61 FcAg-Ab2987716157 (Table II, p. 1468)1.50E-08-14.2
2531FC2C:DStaphylococcus aureus IgG-binding protein AHuman IgG1 MO61 FcAg-AbCompetitive binding assayPBS with 0.5% gelatin2988332602 (Table II, p. 446)6.25E-08-14.2
2541FC2C:DStaphylococcus aureus IgG-binding protein AHuman IgG1 MO61 FcAg-AbSurface Plasmon Resonance137 mM NaCl, 2.7 mM KCl, 1.5 mM KH2PO4, 8.1 mM Na2HPO4, 0.05% Surfactant P202987.38588944 (Table 2, p. 275)1.68E-08-10.6
2551FCCA:CStreptococcus protein G domain B1Human IgG Fc fragmentAg-AbFluorescence20 mM phosphate buffer298610452608 (Table 1, p. 1644)2.40E-070
2562NU0E:IStreptomyces griseus streptogrisin-A/serine protease A (SGPA)Meleagris gallopavo (turkey) ovomucoid (OMTKY3)EITitration0.1 M Tris-HCl, 0.005% Triton X-100, 0.02 M CaCl22948.39047374 (Table 1, p. 443)3.33E-12-15.44
2573SGBE:IStreptomyces griseus streptogrisin-B/serine protease B (SGPB)Meleagris gallopavo (turkey) ovomucoid (OMTKY3)EISpectroscopy0.1 M Tris-HCl, 0.005% Triton X-100, 0.02 M CaCl22948.311171964 (data previously accessible online here, please check SKEMPI Notes for details on the data source)1.79E-11-14.46
2583SGBE:IStreptomyces griseus streptogrisin-B/serine protease B (SGPB)Meleagris gallopavo (turkey) ovomucoid (OMTKY3)EISpectroscopy0.1 M Tris-HCl, 0.005% Triton X-100, 0.02 M CaCl22948.312767228 (Tables 1 and 2, p. 6462, Table 3, p. 6463)1.66E-11-14.5
2593SGBE:IStreptomyces griseus streptogrisin-B/serine protease B (SGPB)Meleagris gallopavo (turkey) ovomucoid (OMTKY3)EI294Stephen Ming-teh Lu, PhD Thesis, Purdue University, 2000 (See SKEMPI for data source)1.79E-11-14.46
260Sus scrofa chymotrypsin-like elastase family member 1, pancreatic/elastase-1Escherichia coli ecotinEIFluorescence50mM Tris-HCl, 20mM CaCl2, 0.005% (w/v) Triton X-1002948.38143850 (Table 1, p.59)1.30E-09-11.95
261Sus scrofa chymotrypsin-like elastase family member 1, pancreatic/elastase-1Meleagris gallopavo (turkey) ovomucoid (OMTKY3)EITitration0.1 M Tris-HCl, 0.005% Triton X-100, 0.02 M CaCl22948.39047374 (Table 1, p. 443)2.38E-11-14.29
2621FSSA:BTetronarce californica acetylcholinesterase (AChE)Dendroaspis angusticeps fasciculin-2 (fas-2)EIEnzyme activity assay using the colorimetric detection of AChE product50 mM phosphate buffer, 0.1 mg/ml BSA, 0.025% NaN3 (0.15 M) 298824613488 (Table 1, p. 639-40)3.70E-10-12.86
2633WWNA:BThermus thermophilus LysW (TtLysW)Thermus thermophilus LysZ (TtLysZ)Isothermal Titration Calorimetry20mM HEPES-NaOH, 150mM NaCl333825392000 (Table 2, p. 444)6.62E-06-7.89
264Xenopus laevis calmodulinRattus norvegicus nitric-oxide synthase, brain (NOS-1)Isothermal Titration Calorimetry10 mM Hepes, 150 mM NaCl, 10 mM MgCl2, 3 mM CaCl2, 2 mM EGTA, 0.005% (v/v) Tween 202987.412093276 (Table 1, p. 8601)6.45E-08-9.8
265Xenopus laevis calmodulinRattus norvegicus nitric-oxide synthase, brain (NOS-1)Fluorescence10 mM Hepes, 150 mM NaCl, 10 mM MgCl2, 3 mM CaCl2, 2 mM EGTA, 0.005% (v/v) Tween 202987.412093276 (Table 2, p. 8602)6.15E-08-9.83
2661CF4A:BHuman cell division control protein 42 homolog (CDC42)Human activated CDC42 kinase 1 (ACK-1)GCIsothermal Titration Calorimetry29317999470 (Table 1, p. 14092)4.00E-08-9.92