1K0Compressibility
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-25.5-33.12-32.82-36.17-34.54-27-31.84-31.78-32.4-31.78-31.18-30.9-23.25-32.6-26.62-29.88-31.23-30.62-30.24-35.01
Normalized value0.830.240.2600.130.710.340.340.290.340.390.4110.280.740.490.380.430.460.09
2HtThermodynamic transfer hydrophobicity
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.870.661.520.672.870.10.873.151.642.171.670.092.7700.850.070.071.873.772.67
Normalized value0.230.180.40.180.760.030.230.840.440.580.440.020.7300.230.020.020.510.71
3HpSurrounding hydrophobicity
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value13.0511.114.311.4113.8912.212.4215.3411.0114.1913.6211.7211.0611.7812.411.6812.1214.7313.9613.57
Normalized value0.470.020.760.090.670.270.33100.730.60.160.010.180.320.150.260.860.680.59
4PPolarity
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value049.71.4849.90.35051.60.149.50.131.433.381.583.53521.671.660.132.11.61
Normalized value00.960.030.960.0100.9900.9500.030.070.030.0710.030.0300.040.03
5pHiIsoelectric point
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value62.775.055.225.485.977.596.029.745.985.745.416.35.6510.765.685.665.965.895.66
Normalized value0.400.290.310.340.40.60.410.870.40.370.330.440.3610.360.360.40.390.36
6pK'Equilibrium constant with reference to the ionization property of COOH group
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value2.342.011.652.191.892.341.821.362.182.362.282.021.992.171.812.212.12.322.382.2
Normalized value0.960.640.280.810.520.960.4500.80.980.90.650.620.790.440.830.730.9410.82
7MwMolecular weight
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value8913312114716575155131146131149132115146174105119117204181
Normalized value0.110.450.360.560.700.620.430.550.430.570.440.310.550.770.230.340.3310.82
8BlBulkiness
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value11.511.6813.4613.5719.83.413.6721.415.7121.416.2512.8217.4314.4514.289.4715.7721.5721.6118.03
Normalized value0.440.450.550.560.900.560.990.680.990.710.520.770.610.60.330.68110.8
9RfChromatographic index
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value9.92.82.83.218.85.68.217.13.517.614.75.414.894.66.99.514.31715
Normalized value0.44000.0310.180.340.890.040.930.740.160.750.390.110.260.420.720.890.76
10MuRefractive index
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value14.341235.7717.2629.4021.8119.0621.2918.7821.6413.2810.9317.5626.666.3511.0113.9242.5331.55
Normalized value0.340.280.840.410.6900.510.450.50.440.510.310.260.410.630.150.260.3310.74
11HncNormalized consensus hydrophobicity
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.620.90.29-0.741.190.48-0.41.38-1.51.060.64-0.780.12-0.85-2.53-0.18-0.051.080.810.26
Normalized value0.810.880.720.460.950.770.5410.260.920.810.450.680.4300.60.630.920.850.71
12EsmShort and medium range non-bonded energy
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value1.41.161.371.161.141.361.221.191.071.321.31.181.241.120.921.31.251.251.031.03
Normalized value10.50.940.50.460.920.630.560.310.830.790.540.670.4200.790.690.690.230.23
13ElLong-rangenon-bondedenergy
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.490.350.670.370.720.530.540.760.30.650.650.380.460.40.550.450.520.730.830.65
Normalized value0.360.090.70.130.790.430.450.8700.660.660.150.30.190.470.280.420.8110.66
14EtTotal non-bonded energy
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value1.91.522.041.541.861.91.761.951.371.971.961.561.71.521.481.751.771.981.871.69
Normalized value0.790.2210.250.730.790.580.8700.90.880.280.490.220.160.570.60.910.750.48
15PaAlpha-helical tendency
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value1.421.010.71.511.130.5711.081.161.211.450.670.571.110.980.770.831.061.080.69
Normalized value0.90.470.1410.600.460.540.630.680.940.1100.570.440.210.280.520.540.13
16PbBeta-helical tendency
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.830.541.190.371.380.750.871.60.741.31.050.890.551.10.930.751.191.71.371.47
Normalized value0.350.130.6200.760.290.380.920.280.70.510.390.140.550.420.290.6210.750.83
17PtTurn tendency
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.661.461.190.740.61.560.950.471.010.590.61.561.520.980.951.430.960.50.961.14
Normalized value0.170.910.660.250.1210.4400.50.110.1210.960.470.440.880.450.030.450.61
18PcCoil tendency
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.711.211.190.840.711.521.070.660.990.690.591.371.610.871.071.341.080.630.761.07
Normalized value0.120.610.590.250.120.910.470.070.390.100.7610.270.470.740.480.040.170.47
19CaHelical contact area
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value2026253346133739463543282236552028336146
Normalized value0.150.270.250.420.6900.50.540.690.460.620.310.190.480.880.150.310.4210.69
20FMean rms fluctuation al displacement
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.961.140.871.070.691.160.80.761.140.790.781.041.161.071.051.130.960.790.771.01
Normalized value0.570.960.380.81010.230.150.960.210.190.7410.810.770.940.570.210.170.68
21BrBuriedness
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.380.140.570.090.510.380.310.560.040.50.420.150.180.110.070.230.230.480.40.26
Normalized value0.640.1910.090.890.640.510.9800.870.720.210.260.130.060.360.360.830.680.42
22RaSolvent accessible reduction ratio
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value3.72.63.033.36.63.133.577.691.795.885.212.122.122.72.532.432.67.146.253.03
Normalized value0.320.140.210.260.820.230.3100.690.580.060.060.150.130.110.140.910.760.21
23NsAverage number of surrounding residues
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value6.054.957.865.16.626.165.87.514.887.376.395.045.655.455.75.535.817.626.986.73
Normalized value0.390.0210.070.580.430.310.8800.840.510.050.260.190.280.220.310.920.70.62
24aNPower to beat the N-terminal of alphahelix
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value1.590.530.331.451.140.530.891.221.131.911.250.5300.980.670.70.751.421.330.58
Normalized value0.830.280.170.760.60.280.470.640.5910.650.2800.510.350.370.390.740.70.3
25aCPower to beat the C-terminal of alphahelix
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value1.442.130.762.011.010.620.560.680.590.580.730.932.191.20.390.811.250.631.40.72
Normalized value0.580.970.210.90.340.130.090.160.110.110.190.310.4500.230.480.130.560.18
26aMPower to beat the middle of alphahelix
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value1.220.561.531.281.130.42.230.771.651.051.470.9301.631.590.870.461.20.460.52
Normalized value0.550.250.690.570.510.1810.350.740.470.660.4200.730.710.390.210.540.210.23
27V0Partial-specific volume
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value60.4673.8367.785.88121.4843.2598.79107.72108.5107.75105.3578.0182.8393.9127.3460.6276.8390.78143.91123.6
Normalized value0.170.30.240.420.7800.550.640.650.640.620.350.390.50.840.170.330.4710.8
28NmAverage medium-range contacts
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value2.111.81.882.091.981.531.981.771.962.192.271.841.322.031.941.571.571.631.91.67
Normalized value0.830.510.590.810.690.220.690.470.670.9210.5500.750.650.260.260.330.610.37
29NlAverage long-range contacts
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value3.922.855.552.724.534.313.775.582.794.594.143.643.573.063.783.754.095.434.834.93
Normalized value0.420.050.9900.630.560.3710.020.650.50.320.30.120.370.360.480.950.740.77
30HgmCombined surrounding hydrophobicity (globularandmembrane)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value13.8511.6115.3711.3813.9313.3413.8215.2811.5814.1313.8613.0212.3512.6113.113.3912.714.5615.4813.88
Normalized value0.60.060.9700.620.480.60.950.050.670.60.40.240.30.420.490.320.7810.61
31ASADSolvent accessible surface area for denatured protein
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value104132.2132.5161.918273.4165.8171.5195.2161.4189.8134.9135.1164.9210.2111.4130.4143.9208.8196.4
Normalized value0.220.430.430.650.7900.680.720.890.640.850.450.450.6710.280.420.520.990.9
32ASANSolvent accessible surface area for native protein
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value33.262.417.98133.129.257.728.3107.531.141.360.560.771.594.548.75228.139.550.4
Normalized value0.170.500.70.170.130.440.1210.150.260.480.480.60.850.340.380.110.240.36
33DASASolvent accessible surface area for protein unfolding
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value70.969.6114.380.5148.444107.9142.787.5129.8147.97473.593.311662.878115.6167.8145.9
Normalized value0.220.210.570.290.8400.520.80.350.690.840.240.240.40.580.150.270.5810.82
34DGhGibbs free energy change of hydration for unfolding
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-0.54-2.97-1.64-3.71-1.06-0.59-3.380.32-2.190.27-0.6-3.550.32-3.92-5.96-3.82-1.970.13-3.8-5.64
Normalized value0.860.480.690.360.780.860.4110.60.990.850.3810.3200.340.640.970.340.05
35GhDGibbs free energy change of hydration for denatured protein
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-0.58-6.1-1.91-7.37-1.35-0.82-5.570.4-5.970.35-0.71-6.630.56-7.12-12.78-6.18-3.660.18-4.71-8.45
Normalized value0.910.50.810.410.860.90.540.990.510.980.90.4610.4200.490.680.970.60.32
36GdNGibbs free energy change of hydration for native protein
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-0.06-3.11-0.27-3.62-0.28-0.23-2.180.07-1.70.07-0.1-3.030.23-3.15-6.85-2.36-1.690.04-0.88-2.82
Normalized value0.960.530.930.460.930.940.660.980.730.980.950.5410.5200.630.730.970.840.57
37DHhUnfolding enthalpy change of hydration
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-2.24-4.54-3.43-5.63-5.11-1.46-6.83-3.84-5.02-3.52-4.16-5.68-1.95-6.23-10.43-5.94-4.39-3.15-8.99-10.67
Normalized value0.920.670.790.550.610.420.740.610.780.710.540.950.480.030.510.680.820.180
38-TDShUnfolding entropy change of hydration
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value1.71.571.791.924.050.873.454.162.833.793.562.132.272.314.472.122.423.285.195.03
0.190.160.210.240.7400.60.760.450.680.620.290.320.330.830.290.360.5610.96
39DCphUnfolding hydration heat capacity change
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value14.222.739.413.1739.064.8820.0541.9817.6838.2631.673.9123.693.7416.666.1416.1132.5837.6930.54
Normalized value0.2900.170.010.930.050.4410.380.910.740.030.530.030.350.090.340.760.890.71
40DGcUnfolding Gibbs free energy change of chain
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.512.892.713.583.220.683.95-0.41.87-0.351.133.26-0.393.695.253.421.74-0.195.596.56
Normalized value0.130.470.450.570.520.160.6200.330.010.220.5300.590.810.550.310.030.861
41DHcUnfolding enthalpy change of chain
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value2.774.728.645.6911.931.237.644.033.573.697.063.641.974.476.035.84.423.4513.4614.41
Normalized value0.120.260.560.340.8100.490.210.180.190.440.180.060.250.360.350.240.170.931
42-TDScUnfolding entropy change of chain
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-2.25-1.83-5.92-2.11-8.71-0.55-3.69-4.42-1.7-4.04-5.93-0.39-2.36-0.78-0.78-2.38-2.68-3.64-7.87-7.95
Normalized value0.780.830.340.7900.980.60.520.840.560.3310.760.950.950.760.720.610.10.09
43DGcUnfolding Gibbs free energy change
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-0.02-0.081.08-0.132.160.090.56-0.08-0.32-0.080.53-0.3-0.06-0.23-0.71-0.4-0.24-0.061.780.91
Normalized value0.240.220.620.210.280.440.220.140.220.430.140.230.1700.110.160.230.870.56
44DHcUnfolding enthalpy change
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.510.185.210.056.82-0.230.790.19-1.450.172.89-2.030.02-1.76-4.4-0.160.040.34.473.73
Normalized value0.440.410.860.410.370.460.410.260.410.650.210.390.2400.380.40.420.790.72
45-TDScUnfolding entropy change
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-0.54-0.26-4.14-0.19-4.660.31-0.23-0.271.13-0.24-2.361.74-0.081.533.69-0.24-0.28-0.36-2.69-2.82
Normalized value0.490.530.060.5400.60.530.530.690.530.280.770.550.7410.530.520.510.240.22
46vVolume (number of non-hydrogen side chain atoms)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value142570645444357233108
Normalized value0.10.40.20.50.700.60.40.50.40.40.40.30.50.70.20.30.310.8
47sShape (position of branch point in aside-chain)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value02032021020203501122
Normalized value00.400.60.400.40.200.400.400.6100.20.20.40.4
48fFlexibility (number of side-chain dihedral angles)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value02132022423203511122
Normalized value00.40.20.60.400.40.40.80.40.60.400.610.20.20.20.40.4
49Pf-sBackbone dihedral probability
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.652.60.950.80.553.552.80.051.70.350.555.2501.41.451.10.050.10.650.95
Normalized value0.120.50.180.150.10.680.530.010.320.070.1100.270.280.210.010.020.120.18
50ARGP820101Hydrophobicity index (Argos et al. 1982)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.841.270.590.571.150.940.811.290.861.10.880.660.81.021.041.051.21.561.151.39
Normalized value 0.23 0.4 0.17 0.18 0.76 0.03 0.23 0.84 0.43 0.58 0.45 0.02 0.74 0 0.23 0.02 0.02 0.5 1 1
51BIGC670101Residue volume (Bigelow 1967)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.910.931.40.970.721.510.90.650.820.590.581.641.660.9411.231.040.60.670.92
Normalized value 0.16 0.5 0.5 0.63 0.84 0.27 0.68 0.75 0.78 0.75 0.72 0.56 0.54 0.66 0.81 0.4 0.53 0.63 1 1
52BIOV880102Information value for accessibility; average fraction 23% (Biou et al. 1988)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value4490-91-139148-847100-188108121-72-36-117-68-60-5411716322
Normalized value 0.66 0.79 0.28 0.14 0.96 0.51 0.67 0.82 0 0.8 0.85 0.16 0.29 0 0 0 0 0.72 1 1
53BURA740102Normalized frequency of extended structure (Burgess et al. 1974)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value8.15.51312.35.2910.45.211.34.95.711.6810.510.59.28.65.95.46.2
Normalized value 0.26 1 0.09 0.19 0.25 0.24 0.12 0.35 0.19 0.34 0.31 0.15 0.28 0.26 0.3 0.29 0.33 0.45 0.16 0.37
54CHAM820101Polarizability parameter (Charton-Charton 1982)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value315554831323961111191111055632.585124326184170136
Normalized value 0.11 0.31 0.26 0.37 0.71 0 0.32 0.26 0.31 0.26 0.31 0.19 0.18 0.25 0.41 0.09 0.15 0.2 0.58 0.42
55CHOC760101Residue accessible surface area in tripeptide (Chothia 1976)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value10.16.56.21.41.12.80.85.30.80.72.20.92.12.31.71.50.91.92.1
Normalized value 0.22 0.53 0.59 0.74 0.82 0.29 0.76 0.69 0.78 0.67 0.73 0.63 0.57 0.71 0.88 0.45 0.55 0.61 1 1
56CHOP780202Normalized frequency of beta-sheet (Chou-Fasman 1978b)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.861.390.690.661.160.71.061.310.771.011.060.741.160.890.981.091.241.41.171.28
Normalized value 0.35 0.62 0.14 0.15 0.79 0.39 0.47 0.94 0.38 0.74 0.58 0.48 0.26 0.61 0.51 0.39 0.67 1 0.92 1
57CHOP780204Normalized frequency of N-terminal helix (Chou-Fasman 1978b)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.780.61.50.970.671.730.830.41.010.570.31.561.550.781.061.191.090.440.741.14
Normalized value 0.43 0.12 0.82 1 0.26 0.34 0.32 0.29 0.29 0.24 0.31 0.37 1 0.82 0.24 0.46 0.71 0.36 1 0.64
58DAYM780201Relative mutability (Dayhoff et al. 1978b)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value1.090.50.770.920.51.250.670.661.250.440.451.142.960.830.971.211.330.560.620.94
Normalized value 0.71 0.14 0.79 0.76 0.31 0.36 0.49 0.72 0.42 0.3 0.7 1 0.47 0.77 0.54 1 1 1 0.44 1
59EISD860101Solvation free energy (Eisenberg-McLachlan 1986)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.871.520.660.672.870.10.873.151.642.171.670.092.7700.850.070.071.873.772.67
Normalized value 0.59 0.53 0.19 0.29 0.94 0.45 0.58 0.85 0.33 0.85 0.96 0.32 0.7 0.4 0 0 0.2 0.58 1 1
60FASG760101Molecular weight (Fasman 1976)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value5.31.33.63.32.34.81.43.14.14.71.132.52.42.64.53.74.20.82.3
Normalized value 0.11 0.59 0.65 0.72 0.81 0.37 0.76 0.64 0.72 0.64 0.73 0.65 0.56 0.72 0.85 0.51 0.58 0.57 1 1
61FASG760102Melting point (Fasman 1976)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.811.170.710.531.20.880.921.480.771.241.050.620.610.980.850.921.181.661.181.23
Normalized value 0.72 0.52 0.78 0.72 0.83 0.84 0.8 0.83 0.65 0.98 0.82 0.69 0.64 0.54 0.69 0.66 0.74 0.85 0.82 1
62FAUJ830101Hydrophobic parameter pi (Fauchere-Pliska 1983)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value1.450.70.911.291.20.531.131.231.271.561.830.640.211.141.150.480.771.11.170.74
Normalized value 0.4 0.78 0.07 0.11 0.86 0.31 0.35 0.86 0.01 0.83 0.69 0.13 0.53 0.24 0 0 0.12 0.54 1 0.96
63FAUJ880101Graph shape index (Fauchere et al. 1988)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value1.0410.961.0331.0940.931.1420.9821.0021.0930.9670.9471.1171.0551.1651.0381.1691.0730.9820.9250.961
Normalized value 0.31 0.42 0.38 0.37 0.7 0 0.71 1 0.51 0.71 0.64 0.44 0.73 0.43 0.64 0.36 0.83 1 1 1
64FAUJ880106STERIMOL maximum width of the side chain (Fauchere et al. 1988)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value4.6-15.75.63.27.64.52.67.93.251.45.976.16.55.254.83.444.35
Normalized value 0.18 0.49 0.55 0.48 0.89 0.13 0.84 0.51 0.72 0.66 0.71 0.64 0.63 0.52 0.93 0.39 0.46 0.46 0.88 1
65GEIM800105Beta-strand indices (Geisow-Roberts 1980)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value4.321.736.046.172.596.095.662.317.923.932.446.247.196.136.555.375.163.312.783.58
Normalized value 0.27 0.77 0.25 0.25 0.69 0.53 0.43 0.79 0.47 0.65 0.48 0.31 0.42 0.59 0.6 0.61 0.73 1 0.79 1
66GEIM800108Aperiodic indices (Geisow-Roberts 1980)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-0.48-0.32-0.75-0.711.030-0.510.81-0.091.020.81-0.872.03-0.32-0.060.05-0.350.560.661.24
Normalized value 0.31 0.46 0.81 0.49 0.31 0.89 0.44 0.25 0.4 0.24 0.24 0.99 1 0.71 0.77 1 1 0.47 0.57 0.89
67GRAR740102Polarity (Grantham 1974)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-0.5-12.52.5-2.50-0.5-1.83-1.8-1.30.2-1.40.230.3-0.4-1.5-3.4-2.3
Normalized value 0.4 0.4 1 1 0.43 0.77 0.89 0.43 0.97 0.4 0.47 1 0.75 1 1 1 1 0.95 0.86 1
68GRAR740103Volume (Grantham 1974)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.921.160.480.611.250.610.931.810.71.31.190.60.40.950.930.821.121.811.541.53
Normalized value 0.17 0.32 0.32 0.49 0.78 0.02 0.56 0.65 0.7 0.65 0.62 0.33 0.19 0.5 0.73 0.19 0.36 0.49 1 1
69HOPA770101Hydration number (Hopfinger 1971) Cited by Charton-Charton (1982)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.91.240.470.621.230.561.121.540.741.261.090.620.421.181.020.871.31.531.751.68
Normalized value 0.14 0 1 1 0.26 0.21 0.53 0.15 1 0.35 0.3 0.96 0.39 0.91 1 0.81 0.71 0.43 0.9 1
70ISOY800102Normalized relative frequency of extended structure (Isogai et al. 1980)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value12.9714.6310.8511.891412.4312.1615.6711.3614.914.3911.4211.3711.7611.7211.2311.6915.7113.9313.42
Normalized value 0.27 0.99 0.37 0.34 0.79 0.38 0.7 0.92 0.44 0.65 0.7 0.42 0.79 0.55 0.63 0.73 0.86 1 0.89 1
71ISOY800103Normalized relative frequency of bend (Isogai et al. 1980)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.861.170.720.621.160.971.061.240.790.981.080.741.220.890.941.041.181.331.071.25
Normalized value 0.34 0.21 0.85 0.5 0.3 1 0.46 0.14 0.61 0.3 0.11 1 1 0.62 0.88 1 0.95 0.32 0.61 1
72ISOY800104Normalized relative frequency of bend R (Isogai et al. 1980)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value11.091.391.040.650.460.710.681.051.010.360.871.951.131.181.561.230.581.10.87
Normalized value 0.26 0.09 0.24 0.29 0.14 0.4 0.2 0.2 0.4 0.12 0.13 0.37 1 0.6 0.71 0.9 1 0.52 0.58 0.93
73JOND750101Hydrophobicity (Jones 1975)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value2.363.361.671.744.372.062.414.171.233.934.221.71.891.751.921.812.043.493.822.91
Normalized value 0.23 0.4 0.18 0.18 0.76 0.03 0.23 0.84 0.44 0.58 0.44 0.02 0.73 0 0.23 0.02 0.02 0.5 1 1
74JUKT750101Amino acid distribution (Jukes et al. 1975)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.961.130.90.331.370.90.871.540.811.261.290.720.751.180.670.771.231.411.131.07
Normalized value 1 0.13 0.74 0.68 0.47 1 0.28 0.65 0.87 1 0.22 0.66 0.54 0.52 0.57 1 0.88 1 0.31 1
75KANM800102Average relative probability of beta-sheet (Kanehisa-Tsong 1980)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.721.011.040.750.581.350.760.80.840.630.621.381.430.811.331.341.030.830.871.35
Normalized value 0.25 0.65 0.33 0.2 0.68 0.47 0.49 0.88 0.39 0.71 0.58 0.29 0.28 0.53 0.45 0.49 0.67 1 0.95 1
76KANM800103Average relative probability of inner helix (Kanehisa-Tsong 1980)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.2880.5330.2710.2620.3180.3120.20.4110.2650.40.3750.2290.340.3270.3620.3540.3880.4950.2310.429
Normalized value 0.77 0.3 0.43 0.67 0.61 0.2 0.57 0.63 0.66 0.83 1 0.45 0.01 0.97 0.98 0.4 0.65 0.94 1 0.74
77KARP850101Flexibility parameter for no rigid neighbors (Karplus-Schulz 1985)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.611.070.460.472.020.070.612.221.151.531.180.061.9500.60.050.051.322.651.88
Normalized value 0.48 0.7 0.8 0.89 0.66 0.96 0.73 0.76 0.89 0.71 0.68 0.93 0.84 0.99 0.81 1 1 0.97 0.86 0.93
78KRIW710101Side chain interaction parameter (Krigbaum-Rubin 1971)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-0.224.66-4.12-3.645.27-1.621.285.58-4.185.013.51-2.65-3.03-2.76-0.93-2.84-1.24.455.22.15
Normalized value 0.63 0 0.72 0.71 0.41 0.96 0.57 0.33 1 0.46 0.2 0.84 1 0.94 1 1 1 0.78 0.92 1
79KRIW790101Side chain interaction parameter (Krigbaum-Komoriya 1979)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-0.491-0.67-0.356-0.371-0.729-0.534-0.54-0.762-0.3-0.65-0.659-0.382-0.463-0.405-0.554-0.455-0.515-0.728-0.839-0.656
Normalized value 0.42 0.17 0.76 0.77 0.31 0.76 0.71 0.28 1 0.54 0.32 0.86 1 0.93 1 1 1 0.92 0.77 1
80LAWE840101Transfer free energy CHP/water (Lawson et al. 1984)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.460.2-0.330.480.520.64-1.313.28-1.710.430.151.31-0.58-1.12-1.54-0.83-1.520.541.25-2.21
Normalized value 0.13 0.19 0.04 0.06 0.66 0.3 0.12 0.58 0.27 0.65 0.58 0 1 0.02 0.18 0.25 0 0.45 0.53 1
81LEVM760101Hydrophobic parameter (Levitt 1976)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.0460.1280.1050.1510.2900.230.1860.2190.1860.2210.1340.1310.180.2910.0620.1080.140.4090.298
Normalized value 0.45 0.38 0.92 0.92 0.14 0.53 0.45 0.25 1 0.25 0.33 0.56 0.31 0.56 1 0.84 0.68 0.43 0 0
82LIFS790101Conformational preference for all beta-strands (Lifson-Sander 1979)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value4.55-0.782.855.164.379.144.482.110.683.242.185.565.144.155.976.788.63.811.972.4
Normalized value 0.37 0.55 0.08 0.31 0.68 0.31 0.49 1 0.36 0.71 0.64 0.3 0.19 0.5 0.49 0.43 0.6 1 1 1
83LIFS790103Conformational preference for antiparallel beta-strands (Lifson-Sander 1979)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value7.6210.936.186.388.997.317.859.995.729.379.836.176.646.676.816.937.0810.388.418.53
Normalized value 0.36 0.63 0.08 0.32 0.69 0.29 0.62 0.87 0.4 0.71 0.61 0.32 0.2 0.66 0.56 0.47 0.73 0.87 1 1
84MANP780101Average surrounding hydrophobicity (Manavalan-Ponnuswamy 1978)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value2.633.362.292.313.022.552.573.082.122.983.182.272.462.452.452.62.553.212.852.79
Normalized value 0.44 0.93 0.68 0.75 0.89 0.79 0.77 1 0.72 0.95 0.91 0.72 0.72 0.74 0.74 0.71 0.74 1 1 1
85MAXF760102Normalized frequency of extended structure (Maxfield-Scheraga 1976)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value3.73.032.63.36.63.133.577.691.795.885.212.122.122.72.532.432.67.146.253.03
Normalized value 0.34 0.84 0.39 0.28 0.84 0.66 0.74 0.91 0.48 0.67 0.76 0.44 0.89 0.58 0.63 0.72 0.86 1 0.81 1
86MAXF760106Normalized frequency of alpha region (Maxfield-Scheraga 1976)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.780.81.4110.581.640.690.510.960.590.391.281.910.970.881.331.030.470.751.05
Normalized value 0.4 0.46 0.65 0.43 0.18 0.16 0.31 0.29 0.5 0.48 0.11 0.41 1 0.7 0.74 1 1 0.47 1 0.85
87MIYS850101Effective partition energy (Miyazawa-Jernigan 1985)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.9340.90.9940.9860.7731.0150.8820.7661.040.8250.8040.9861.0471.0470.9621.0561.0080.8250.8480.931
88Normalized value 0.36 0.75 0.33 0.35 1 0.45 0.54 0.99 0.23 0.93 1 0.41 0.46 0.42 0.47 0.44 0.5 0.91 1 1
89NAGK730102Normalized frequency of bata-structure (Nagano 1973)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.9410.8661.0711.10.7231.0550.9110.7421.2320.7980.7811.0381.0931.151.1121.0821.0430.8170.8671.05
Normalized value 0.52 0.66 0.47 0 0.89 0.58 0.56 1 0.57 0.89 0.91 0.51 0.53 0.84 0.48 0.55 0.87 1 1 1
90NAGK730103Normalized frequency of coil (Nagano 1973)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value17.0528.8419.2720.1216.2638.1423.0716.6616.4610.8920.6134.8123.9415.4221.2519.9518.9217.0623.3626.49
Normalized value 0.16 0.67 0.69 0.46 0.33 0.94 0.47 0.5 0.53 0.37 0.36 0.96 1 0.54 0.98 0.99 0.73 0.56 0.6 1
91NISK86010114 A contact number (Nishikawa-Ooi 1986)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value11513515019021075195175200170185160145180225115140155255230
Normalized value 0.41 0.91 0.01 0.06 0.97 0.26 0.56 1 0 0.98 0.79 0.05 0 0.01 0.24 0 0 0.86 1 1
92OOBM770103Long range non-bonded energy per atom (Oobatake-Ooi 1977)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-2.34.4-4.4-52.6-4.2-2.56.7-3.32.32.3-4.1-1.81.20.4-1.71.36.8-14
Normalized value 0.65 0.11 0.33 0.32 0.07 0.21 0.2 0.05 0.36 0.13 0.12 0.31 0.25 0.29 0.19 0.26 0.22 0.07 0 0
93OOBM850103Optimized transfer energy parameter (Oobatake et al. 1985)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-0.67-21.571.78-3.2401.09-3.022.46-3.02-1.672.27-1.752.123.890.1-0.42-2.18-2.860.98
Normalized value 0.49 0.44 0.34 0.49 0.5 0.52 0.16 1 0.14 0.75 0.67 1 0.47 0.32 0.19 0.4 0.2 0.79 1 0
94OOBM850105Optimized side chain interaction parameter (Oobatake et al. 1985)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.730.70.540.552.6501.12.971.52.491.3-0.012.6-0.10.730.040.441.6932.97
Normalized value 0.47 0 0.27 0.48 0.41 0.86 0.42 0.2 1 0.38 0.25 0.65 0.6 0.48 0.69 0.79 1 1 0.82 1
95PONP800102Average gain in surrounding hydrophobicity (Ponnuswamy et al. 1980)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value75.51312.557.98.44.910.14.95.3106.68.69.17.56.65.65.35.7
Normalized value 0.36 1 0.58 0.6 0.86 0.69 0.75 0.96 0.53 0.9 0.95 0.58 0.63 0.63 0.64 0.66 0.67 1 0.99 1
96PONP800103Average gain ratio in surrounding hydrophobicity (Ponnuswamy et al. 1980)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.831.190.540.371.380.750.871.60.741.31.050.890.551.10.930.751.191.71.371.47
Normalized value 0.41 1 0.67 0.68 0.93 0.76 0.77 0.95 0.61 0.92 0.99 0.66 0.73 0.73 0.73 0.78 0.76 1 1 1
97PONP800107Accessibility reduction ratio (Ponnuswamy et al. 1980)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value6.88.374.98.36.49.2107.512.28.46.26.98.50879.45.76.8
Normalized value 0.32 0.37 0.31 0.41 0.85 0.38 0.44 1 0.22 0.82 0.72 0.27 0.27 0.36 0.33 0.32 0.34 1 1 1
98PRAM900104Relative frequency in reverse-turn (Prabhakaran 1990)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.831.480.640.652.750.11.13.071.62.521.40.092.700.830.140.541.790.312.97
Normalized value 0.26 0.33 0.7 0.45 0.2 0.84 0.29 0.18 0.45 0.24 0.12 0.65 1 0.7 0.63 1 0.98 0.38 0.68 1
99RACS770101Average reduced distance for C-alpha (Rackovsky-Scheraga 1977)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value11.513.4611.6813.5719.83.413.6921.415.7121.416.2512.8217.4314.4514.289.4715.7721.5721.6718.03
Normalized value 0.58 0.67 0.87 0.85 0.41 0.94 0.73 0.55 0.98 0.64 0.61 0.89 0.99 0.99 0.86 1 1 0.71 0.74 0.88
100RACS770102Average reduced distance for side chain (Rackovsky-Scheraga 1977)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value9.92.82.83.218.85.68.217.13.517.614.95.414.894.66.99.514.317.115
Normalized value 0.43 0.54 0.8 0.84 0.37 0.8 0.63 0.43 1 0.55 0.53 0.86 0.93 1 1 1 0.99 0.66 0.73 1
101RACS820113Value of theta(i) (Rackovsky-Scheraga 1982)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value1.290.662.022.440.610.760.730.670.660.580.710.812.011.220.440.741.080.611.470.68
Normalized value 0.23 0.75 0.5 0.52 0.42 1 0.66 0.48 0.47 0.31 0.59 1 0.9 0.58 0.8 0.75 0.71 0.64 0.88 1
102ROBB760105Information measure for extended (Robson-Suzuki 1976)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-0.77-0.23-0.15-0.27-0.410-0.06-0.23-0.65-0.62-0.5-0.073-0.33-0.68-0.35-0.11-0.14-0.45-0.17
Normalized value 0.23 0.8 0.05 0 0.62 0 0.15 0.99 0.07 0.59 0.59 0 0 0.34 0.25 0 0.29 1 0 1
103ROSM880102Side chain hydropathy corrected for solvation (Roseman 1988)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.9840.9061.0681.0940.9151.0310.950.9271.1020.9350.9521.0481.0491.0371.0081.0460.9970.9310.9040.929
Normalized value 0.36 0.17 0.67 0.7 0 0.44 0.59 0 0.79 0 0.18 0.76 0.16 0.74 1 0.77 0.63 0.18 0 0.98
104SIMZ760101Transfer free energy (Simon 1976) Cited by Charton-Charton (1982)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value58116-97-13192-11-73107-249578-93-79-139-184-34-710059-11
Normalized value 0.27 0.26 0.21 0.21 0.89 0.03 0.39 0.99 0.52 0.84 0.45 0.03 0.87 0 0.24 0.01 0.15 0.56 1 1
105WOEC730101Polar requirement (Woese 1973)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value51137-78-115108-13-55106-20510373-84-79-128-144-26-31086911
Normalized value 0.26 0.41 1 1 0.48 0.78 0.83 0.47 1 0.48 0.52 1 0.72 0.94 1 1 1 0.98 0.93 1
106YUTK870102Unfolding Gibbs energy in water pH9.0 (Yutani et al. 1987)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value32182-29-74132-22-25106-12410482-73-82-95-95-342011311844
Normalized value 0.56 0.68 0.57 0.4 0.68 0.52 0.75 0.82 0.61 1 0.89 0.66 0.73 0.9 0 0.85 0.74 1 0.84 1
107ZIMJ680101Hydrophobicity (Zimmerman et al. 1968)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value241940-57131-28-31102-910390-76-85-87-79-363411111643
Normalized value 0.27 0.48 0.21 0.21 0.9 0.03 0.36 1 0.54 0.85 0.47 0.03 0.91 0 0.28 0.05 0.18 0.6 0.1 1
108ZIMJ680102Bulkiness (Zimmerman et al. 1968)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value6.770.318.5712.931.927.952.82.7210.24.431.875.54.795.246.875.415.363.570.542.26
Normalized value 0.44 0.61 0.53 0.62 0.91 0.14 0.63 0.99 0.72 0.99 0.75 0.59 0.8 0.66 0.66 0.43 0.73 1 1 1
109ZIMJ680105RF rank (Zimmerman et al. 1968)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value7.430.428.715.861.189.41.491.769.672.740.69.125.65.424.519.68.953.11.183.26
Normalized value 0.44 0.13 0.14 0.16 1 0.31 0.46 0.97 0.19 1 0.87 0.31 0.86 0.52 0.26 0.4 0.55 0.84 1 1
110ONEK900102Helix formation parameters (delta delta G) (O'Neil-DeGrado 1990)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.780.551.351.450.470.680.990.471.10.560.661.20.691.191.5811.050.510.71
Normalized value 0 0.12 0.14 0.11 0.07 0.18 0.17 0.12 0.01 0.02 0.05 0.17 1 0.21 0 0.07 0.23 0.21 0 0
111VINM940101Normalized flexibility parameters (B-values) average (Vihinen et al. 1994)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value2.183.891.751.895.881.172.514.52.124.713.631.852.092.162.711.662.183.776.465.01
Normalized value 0.4 0.72 0.95 0.99 0.73 0.9 0.78 0.75 1 0.82 0.85 1 1 0.99 0.94 1 0.99 0.88 0.84 0.88
112NADH010101Hydropathy scale based on self-information values in the two-state model (5% accessibility) (Naderi-Manesh et al. 2001)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value1.792.222.332.524.840.73.064.592.54.723.912.832.452.373.21.822.453.675.644.46
Normalized value 0.81 1 0.3 0.18 0.95 0.59 0.38 1 0.56 0.98 0.92 0.32 0.37 0.16 0 0 0.04 1 1 0
113NADH010102Hydropathy scale based on self-information values in the two-state model (9% accessibility) (Naderi-Manesh et al. 2001)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value13.422.68.27.323.9711.320.36.120.815.77.69.98.58.58.210.319.524.519.5
Normalized value 0.75 1 0.41 0.29 1 0.61 0.48 0.99 0 0.98 0.86 0.24 0.26 0.06 0 0 0 1 1 1
114NADH010104Hydropathy scale based on self-information values in the two-state model (20% accessibility) (Naderi-Manesh et al. 2001)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value91.5114.4135.2154.6198.867.5163.2162.6162.5163.4165.9138.3123.4156.4196.1102126138.4209.8237.2
Normalized value 0.51 1 0.37 0.2 1 0.42 0.41 0.95 0 0.93 0.83 0.1 0.06 0 0 0 0.17 0.96 1 1
115NADH010105Hydropathy scale based on self-information values in the two-state model (25% accessibility) (Naderi-Manesh et al. 2001)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value1.120.59-0.83-0.920.671.2-0.931.16-0.81.180.55-0.830.54-0.78-2.55-0.05-0.021.13-0.19-0.23
Normalized value 0.4 1 0.4 0.14 1 0.29 0.28 0.93 0.38 0.94 0.87 0.05 0.01 0 0 0 0.29 0.96 1 1
116FUKS010102Surface composition of amino acids in intracellular proteins of mesophiles (percent) (Fukuchi-Nishikawa 2001)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value1.381.430.520.711.721.340.662.320.151.471.780.370.850.2200.860.891.990.820.47
Normalized value 0.51 0 0.66 1 0.19 0.78 0.27 0.27 1 0.64 0.27 0.8 0.7 0.76 1 1 1 1 0.24 1
117FUKS010103Surface composition of amino acids in extracellular proteins of mesophiles (percent) (Fukuchi-Nishikawa 2001)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-0.27-1.050.811.17-1.43-0.160.28-0.771.7-1.1-0.730.81-0.751.11.870.420.63-0.4-1.57-0.56
Normalized value 0.76 0 0.9 0.61 0.12 0.97 0.15 0.18 1 0.29 0.06 0.95 0.58 0.56 0.47 1 1 0.95 0.36 1
118KUHL950101Hydrophilicity scale (Kuhn et al. 1995)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-0.4140.162-1.31-1.2181.938-0.684-0.631.237-0.671.2151.02-0.916-0.503-0.905-0.584-0.563-0.2890.8990.5141.699
Normalized value 0.28 0.21 0.83 0.91 0.19 0.35 0.58 0.2 0.65 0.27 0.34 0.73 0.36 0.72 1 0.94 1 0.39 0.63 1
119ZHOH040101The stability scale from the knowledge-based atom-atom potential (Zhou-Zhou 2004)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-0.260.83-1.3-0.731.09-0.4-0.181.1-1.011.521.09-0.46-0.62-0.830.08-0.55-0.711.15-0.130.69
Normalized value 0.19 0.59 0.25 0.27 0.91 0.16 0.37 0.69 0.31 0.72 0.55 0.27 0.31 0.32 0.41 0.24 0.32 0.57 1 1
120ZHOH040102The relative stability scale extracted from mutation experiments (Zhou-Zhou 2004)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-1.354.37-11.88-4.5611.35-5.826.5410.93-11.929.887.47-10.96-10.86-1.34-3.89-6.21-4.838.21.87.61
Normalized value 0.22 0.37 0.39 0.42 0.85 0.09 0.54 0.81 0.43 0.83 0.69 0.49 0.43 0.41 0.56 0.31 0.43 0.65 1 1
121ZHOH040103Buriability (Zhou-Zhou 2004)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value1.37-4.478.934.04-7.963.39-1.65-7.927.7-8.68-7.136.296.253.881.334.084.02-6.940.79-4.73
Normalized value 0.4 0.92 0.32 0.29 0.98 0.28 0.46 0.83 0.24 0.85 0.64 0.3 0.4 0.34 0.34 0.33 0.41 0.79 1 1
122PONJ960101Average volumes of residues (Pontius et al. 1996)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-0.02-0.960.720.74-2.220.380-1.891.01-2.29-1.360.630.470.560.440.550.25-1.34-1.28-0.88
Normalized value 0.14 0.48 0.57 0.65 0.84 0.28 0.69 0.69 0.68 0.69 0.7 0.58 0.52 0.66 0.83 0.43 0.53 0.58 0.88 1
123WOLR790101Hydrophobicity index (Wolfenden et al. 1979)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value-0.21-6.041.362.3-4.650-1.23-4.813.88-4.68-3.660.960.751.522.111.740.78-3.5-3.32-1.01
Normalized value 0.98 0.84 0.46 0.43 0.86 1 0.43 0.99 0.47 1 0.84 0.47 0.84 0.48 0 0.13 0.15 1 0.03 0
124OLSK800101Average internal preferences (Olsen 1980)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value100201061024149669656409413456936512097741841
Normalized value 0.59 0.62 0.22 0.31 0.74 0.58 0.28 1 0.08 0.74 0.89 0.19 0.43 0.11 0 0.43 0.45 1 0.82 0.47
125KIDA850101Hydrophobicity-related index (Kidera et al. 1985)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.670.38-1.2-0.762.300.641.9-0.571.92.4-0.61.2-0.22-2.10.010.521.52.61.6
Normalized value 0.38 0.15 0.69 0.8 0.04 0.41 0.54 0.23 0.95 0.14 0.24 0.69 0.24 0.78 1 0.77 0.86 0.46 0 0
126CORJ870102SWEIG index (Cornette et al. 1987)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value89.09121.15133.1147.13165.1975.07155.16131.17146.19131.17149.21132.12115.13146.15174.2105.09119.12117.15204.24181.19
Normalized value 0.28 0.45 0 0 1 0.09 0.11 0.82 0.09 0.81 0.74 0 0.15 0 0 0 0 0.53 0.3 1
127CORJ870104PRILS index (Cornette et al. 1987)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value297178270249284290277284224337283236222185238228253293282344
Normalized value 0.37 0.76 0 0.11 0.83 0.24 0.33 0.83 0 1 0.97 0.19 0.11 0 0.42 0.09 0 1 0 0.69
128CORJ870106ALTLS index (Cornette et al. 1987)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value0.311.54-0.77-0.641.7900.131.8-0.991.71.23-0.60.72-0.22-1.01-0.040.261.222.250.96
Normalized value 0.45 0.7 0 0.32 1 0.27 0.81 1 0 1 0.96 0 0 0.34 0.16 0 0 1 0.24 1
129CORJ870108TOTLS index (Cornette et al. 1987)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value1.281.771.61.562.9402.994.191.892.592.351.62.671.562.341.313.033.673.212.94
Normalized value 0.57 0.24 1 0.78 0.04 0.74 0.43 0.05 1 0 0 1 1 0.98 0.75 1 1 0 0.96 0
130MIYS990101Relative partition energies derived by the Bethe approximation (Miyazawa-Jernigan 1999)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value2.043.413.783.316.0215.663.494.874.454.84.374.313.536.242.73.173.175.96.72
Normalized value 0.36 0.75 0.33 0.35 1 0.45 0.54 0.99 0.23 0.93 1 0.41 0.46 0.42 0.47 0.44 0.5 0.91 1 1
131FASG890101Hydrophobicity index (Fasman 1989)
Amino acidADCEFGHIKLMNPQRSTVWY
Actual value52.668.368.484.7113.936.391.9102105.110297.775.773.689.7109.154.971.285.1135.4116.2
Normalized value 0.59 0 0.71 0.82 0.02 0.55 0.41 0 1 0 0 0.8 0.76 0.89 1 1 0.95 0 0 0

_________________________________________________________________________________

M. Michael Gromiha "A Statistical Model for Predicting Protein Folding Rates from Amino Acid Sequence with Structural Class Information,J. Chem. Inf. Model., 2005, 45 (2), pp 494-501"

Kawashima, S., Pokarowski, P., Pokarowska, M., Kolinski, A., Katayama, T., and Kanehisa, M."AAindex: amino acid index database, progress report 2008."Nucleic Acids Res. 36, D202-D205 (2008)."